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  • SUMMARY

  • TISSUE

  • BRAIN

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  • CASKIN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

125.489
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:28.2 nTPM
HPA Brain:87.3 nTPM
GTEx:28.2 nTPM
Pig:25.6 nTPM
Mouse:29.7 nTPM
Allen mouse:4.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079050
Hypothalamus mean intensity 125.489
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 34.753
Periventricular hypothalamic nucleus 116.602
Supraoptic nucleus -
Tuberal nucleus 112.952
Ventral tuberomammillary nucleus 80.583
Lateral preoptic area 69.346
Medial preoptic area 75.613
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus -
Anterior hypothalamic area, central -
Ventral medial hypothalamic nucleus 85.732
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 104.176
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 37.600
Dorsal medial hypothalamic nucleus 101.919
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 66.7
1961 Female, age 42, unknown 72.5
2226 Male, age 75, left hemisphere 60.9
Dorsomedial nucleus
nTPM: 87.3
1989 Male, age 62, unknown 126.7
2017 Female, age 42, unknown 72.6
2041 Female, age 72, unknown 62.6
Lateral hypothalamic area
nTPM: 74.3
2412 Male, age 62, unknown 90.2
1791 Male, age 80, right hemisphere 83.9
2271 Male, age 75, both hemispheres 65.0
2228 Male, age 66, unknown 58.3
Mammillary body
nTPM: 77.1
2413 Male, age 66, unknown 104.9
1923 Female, age 72, unknown 90.2
1834 Female, age 42, unknown 65.3
1948 Female, age 72, unknown 64.7
1945 Male, age 80, right hemisphere 60.6
Paraventricular nucleus
nTPM: 50.6
2700 Male, age 62, unknown 50.6
Preoptic area
nTPM: 76.6
1907 Male, age 80, right hemisphere 88.6
1861 Female, age 42, unknown 84.3
2414 Female, age 72, unknown 56.9
Supraoptic nucleus
nTPM: 45.4
2835 Female, age 72, unknown 68.6
1894 Female, age 72, unknown 39.5
2043 Male, age 62, unknown 28.2
Ventromedial nucleus
nTPM: 65.1
1982 Female, age 72, unknown 71.0
1822 Female, age 42, unknown 59.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 28.2
Samples: 257

Max nTPM: 71.4
Min nTPM: 4.5
Std nTPM: 11.5
Median nTPM: 27.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 71.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 62.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 57.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 55.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 55.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 54.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 53.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 53.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 52.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 52.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 50.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 49.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 49.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 49.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 49.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 48.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 48.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 47.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 46.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 46.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 46.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 46.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 46.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 45.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 45.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 44.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 44.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 43.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 43.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 42.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 42.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 42.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 41.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 41.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 41.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 41.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 41.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 40.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 40.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 40.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 39.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 39.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 39.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 39.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 39.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 39.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 38.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 38.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 38.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 38.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 37.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 37.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 37.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 37.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 37.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 36.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 36.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 36.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 36.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 36.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 36.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 36.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 36.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 35.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 35.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 35.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 35.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 34.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 34.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 34.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 34.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 34.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 34.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 34.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 34.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 34.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 33.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 33.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 33.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 33.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 33.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 32.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 32.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 32.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 32.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 32.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 32.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 32.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 31.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 31.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 31.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 30.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 30.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 30.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 30.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 30.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 30.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 30.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 30.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 30.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 29.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 29.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 29.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 29.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 29.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 28.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 28.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 28.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 28.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 28.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 28.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 28.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 28.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 28.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 28.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 27.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 27.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 27.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 27.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 27.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 27.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 27.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 27.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 27.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 27.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 27.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 27.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 27.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 27.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 26.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 26.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 26.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 26.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 26.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 25.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 25.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 25.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 25.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 25.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 25.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 25.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 25.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 25.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 25.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 24.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 24.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 24.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 24.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 24.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 24.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 24.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 24.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 24.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 24.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 24.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 24.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 24.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 24.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 23.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 23.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 23.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 23.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 23.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 23.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 23.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 23.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 22.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 22.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 22.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 22.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 22.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 21.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 21.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 21.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 21.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 21.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 21.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 21.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 21.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 21.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 21.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 21.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 21.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 21.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 21.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 21.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 20.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 20.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 20.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 20.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 20.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 20.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 20.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 20.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 19.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 19.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 19.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 19.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 19.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 19.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 18.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 18.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 18.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 18.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 18.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 18.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 17.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 17.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 17.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 17.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 17.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 17.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 17.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 17.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 17.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 17.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 17.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 16.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 16.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 16.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 16.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 16.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 15.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 15.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 15.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 15.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 15.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 14.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 14.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 14.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 14.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 14.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 13.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 13.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 13.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 13.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 13.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 12.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 12.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 12.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 12.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 12.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 11.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 11.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 11.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 11.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 11.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 11.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 10.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 9.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 9.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 8.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 8.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 7.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 7.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 5.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 4.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 25.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 20.8
Sample A Female 31.7
Sample B Female 27.6
Sample C Male 22.3
Sample D Male 20.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 29.7
Samples: 4

Max nTPM: 33.2
Min nTPM: 26.5
Sample A Male 32.4
Sample B Male 33.2
Sample C Female 26.8
Sample D Female 26.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.7
69288836 Antisense, RP_050407_01_G01, Mouse strain C57BL/6J (56 days, male) 4.7

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