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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
25.0
Sample id
Sample description
nTPM
Hippocampus nTPM: 23.7
2529
Female, age 94, left hemisphere
27.9
1855
Male, age 76, left hemisphere
24.8
1911
Female, age 85, right hemisphere
23.6
2621
Female, age 67, right hemisphere
23.4
2148
Female, age 91, left hemisphere
22.8
1898
Male, age 80, left hemisphere
19.9
Dentate gyrus nTPM: 23.3
2010
Male, age 76, both hemispheres
25.6
2531
Female, age 67, both hemispheres
25.1
2528
Male, age 74, both hemispheres
23.9
2246
Female, age 85, both hemispheres
23.8
1927
Female, age 91, both hemispheres
23.4
2530
Female, age 94, left hemisphere
17.8
Entorhinal gyrus nTPM: 22.7
2686
Male, age 75, right hemisphere
24.6
2764
Male, age 80, right hemisphere
23.1
1787
Male, age 76, left hemisphere
22.8
1938
Female, age 85, left hemisphere
22.2
2117
Female, age 91, right hemisphere
21.9
2613
Female, age 94, left hemisphere
21.5
Hippocampus, CA1 nTPM: 24.1
2045
Male, age 76, both hemispheres
26.1
2749
Male, age 80, left hemisphere
25.5
2527
Male, age 74, both hemispheres
24.1
2082
Female, age 91, right hemisphere
24.0
1873
Female, age 85, both hemispheres
20.8
Hippocampus, CA2 nTPM: 23.4
1963
Male, age 80, left hemisphere
26.3
1892
Male, age 76, both hemispheres
24.9
2113
Female, age 91, right hemisphere
23.6
2437
Female, age 94, left hemisphere
22.9
1940
Female, age 85, left hemisphere
21.9
2249
Male, age 74, both hemispheres
20.9
Hippocampus, CA3 nTPM: 24.6
2137
Male, age 80, left hemisphere
27.4
2861
Female, age 67, both hemispheres
26.2
2620
Female, age 94, left hemisphere
26.1
1867
Male, age 76, both hemispheres
25.7
1891
Female, age 85, both hemispheres
22.1
2436
Male, age 74, both hemispheres
19.9
Parahippocampal cortex nTPM: 24.7
2692
Male, age 74, both hemispheres
28.0
2245
Female, age 91, both hemispheres
27.8
2018
Male, age 76, both hemispheres
25.9
2622
Female, age 67, right hemisphere
25.4
2250
Female, age 67, right hemisphere
25.2
1933
Female, age 85, both hemispheres
24.2
1990
Female, age 91, right hemisphere
23.4
2693
Female, age 94, both hemispheres
22.8
1850
Male, age 80, both hemispheres
22.4
2532
Female, age 72, left hemisphere
22.1
Perirhinal gyrus nTPM: 22.0
1841
Female, age 85, right hemisphere
23.5
2521
Female, age 94, right hemisphere
22.3
1847
Female, age 91, left hemisphere
21.8
2848
Male, age 76, right hemisphere
21.4
1794
Male, age 80, right hemisphere
20.9
Subiculum nTPM: 25.0
2438
Female, age 94, left hemisphere
29.1
2042
Male, age 76, both hemispheres
27.0
1901
Male, age 80, both hemispheres
25.4
2729
Female, age 91, right hemisphere
23.9
2619
Male, age 74, both hemispheres
23.0
1977
Female, age 85, both hemispheres
21.4
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.8
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 9.8
Samples: 255
Max nTPM: 19.8
Min nTPM: 6.2
Std nTPM: 2.1
Median nTPM: 9.4
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
19.8
GTEX-1N2EF-0011-R1a-SM-F2TAT
60-69 years, male
18.9
GTEX-13PVQ-0011-R1b-SM-GJ3RQ
50-59 years, male
18.0
GTEX-1JMQL-0011-R1a-SM-F3K4U
50-59 years, female
17.4
GTEX-14E6C-0011-R1a-SM-G8W86
40-49 years, male
17.1
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
16.0
GTEX-12696-0011-R1a-SM-GHWPW
60-69 years, male
15.3
GTEX-1LKK1-0011-R1b-SM-F2TAF
50-59 years, female
15.2
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
15.0
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
14.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV
50-59 years, female
14.2
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
13.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
13.7
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
13.3
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
13.2
GTEX-1I19N-0011-R1b-SM-GOR1A
70-79 years, male
13.1
GTEX-ZYFD-0011-R1b-SM-GRR1T
50-59 years, male
13.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
13.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
13.0
GTEX-1N5O9-0011-R1b-SM-F3K4W
60-69 years, male
13.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
12.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
12.7
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
12.7
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
12.7
GTEX-1RQEC-0011-R1b-SM-F2I2E
60-69 years, male
12.7
GTEX-1RNSC-0011-R1b-SM-F342D
60-69 years, male
12.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
12.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
12.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
12.5
GTEX-1JN6P-0011-R1b-SM-G8LL3
60-69 years, male
12.5
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
12.4
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
12.2
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
12.2
GTEX-1LVA9-0011-R1b-SM-F2TB5
50-59 years, male
12.2
GTEX-1LVAO-0011-R1a-SM-F649O
60-69 years, male
12.2
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
12.1
GTEX-1JJ6O-0011-R1b-SM-F2I2M
60-69 years, male
12.1
GTEX-13PLJ-0011-R1a-SM-GJ3QF
60-69 years, female
11.9
GTEX-14DAQ-0011-R1a-SM-G8W85
60-69 years, female
11.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
11.9
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
11.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
11.6
GTEX-1JJEA-0011-R1b-SM-F6495
60-69 years, male
11.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
11.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
11.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
11.4
GTEX-12WSA-0011-R1b-SM-GI4VI
60-69 years, male
11.2
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
11.2
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
11.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
11.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
11.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
11.0
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
11.0
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
11.0
GTEX-1R9K4-0011-R1a-SM-F342F
60-69 years, male
11.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
11.0
GTEX-ZYY3-0011-R1b-SM-GPI92
60-69 years, female
11.0
GTEX-11DYG-0011-R1a-SM-GI4X6
60-69 years, male
10.9
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
10.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
10.9
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
10.9
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
10.9
GTEX-1NV8Z-0011-R1b-SM-F647K
60-69 years, male
10.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
10.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
10.8
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
10.8
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
10.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
10.7
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
10.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
10.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
10.6
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
10.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
10.5
GTEX-1LSNL-0011-R1a-SM-F3K51
50-59 years, male
10.5
GTEX-1O9I2-0011-R1a-SM-F2TAW
50-59 years, male
10.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
10.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
10.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
10.4
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
10.4
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
10.4
GTEX-1KANB-0011-R1a-SM-F3K5M
50-59 years, male
10.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
10.3
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
10.3
GTEX-1MA7X-0011-R1b-SM-F2TAB
60-69 years, male
10.3
GTEX-1PPGY-0011-R1b-SM-G8LN3
60-69 years, male
10.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
10.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
10.3
GTEX-11PRG-0011-R1b-SM-H7OHD
50-59 years, male
10.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
10.2
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
10.2
GTEX-1KD4Q-0011-R1a-SM-F3K4Z
40-49 years, male
10.2
GTEX-1KWVE-0011-R1a-SM-F649B
30-39 years, male
10.2
GTEX-RU72-0011-R1A-SM-HAUZG
50-59 years, female
10.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
10.2
GTEX-11TTK-0011-R1b-SM-GIN92
60-69 years, female
10.1
GTEX-12126-0011-R1a-SM-GJ3Q8
20-29 years, male
10.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
10.1
GTEX-13SLX-0011-R1a-SM-H6Q8N
50-59 years, female
10.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
10.1
GTEX-11DXY-0011-R1b-SM-GI4VQ
60-69 years, male
10.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
10.0
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
10.0
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
10.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
10.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
9.9
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
9.9
GTEX-1OJC4-0011-R1a-SM-F2TAZ
50-59 years, female
9.9
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
9.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
9.8
GTEX-1F52S-0011-R1a-SM-9OSX9
60-69 years, female
9.8
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
9.8
GTEX-1MCQQ-0011-R1a-SM-F341G
60-69 years, male
9.8
GTEX-14JFF-0011-R1b-SM-G8W88
60-69 years, male
9.7
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
9.7
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
9.7
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
9.7
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
9.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
9.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
9.6
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
9.6
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
9.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
9.6
GTEX-1JMPZ-0011-R1b-SM-F6497
30-39 years, male
9.6
GTEX-1RQED-0011-R1a-SM-F3K5W
60-69 years, male
9.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
9.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
9.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
9.5
GTEX-117XS-0011-R1b-SM-GJ3PQ
60-69 years, male
9.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
9.4
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
9.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
9.4
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
9.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
9.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
9.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
9.3
GTEX-1JMQK-0011-R1a-SM-F6484
60-69 years, male
9.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
9.2
GTEX-12ZZZ-0011-R1a-SM-GIN8I
60-69 years, male
9.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
9.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
9.2
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
9.2
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
9.2
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
9.2
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
9.2
GTEX-1JMOU-0011-R1b-SM-F341B
60-69 years, female
9.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
9.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
9.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
9.1
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
9.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
9.1
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
9.1
GTEX-1PWST-0011-R1b-SM-F2I38
70-79 years, male
9.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
9.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
9.0
GTEX-13VXU-0011-R1a-SM-GINAT
50-59 years, male
9.0
GTEX-14BMV-0011-R1b-SM-G9ERL
50-59 years, male
9.0
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
9.0
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
9.0
GTEX-1R9PO-0011-R1b-SM-F2I2G
60-69 years, female
9.0
GTEX-1192X-0011-R1b-SM-GI4VU
50-59 years, male
8.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
8.9
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
8.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
8.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
8.9
GTEX-1POEN-0011-R1b-SM-F3K3K
30-39 years, female
8.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
8.9
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
8.9
GTEX-11OF3-0011-R1b-SM-H65ZT
60-69 years, male
8.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
8.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
8.8
GTEX-15DYW-0011-R1a-SM-H6Q6Q
60-69 years, female
8.8
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
8.8
GTEX-1QP6S-0011-R1b-SM-F3K59
40-49 years, male
8.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
8.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
8.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
8.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
8.7
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
8.7
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
8.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
8.7
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
8.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
8.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
8.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
8.6
GTEX-1JMLX-0011-R1b-SM-G9ERV
50-59 years, male
8.6
GTEX-1MJK2-0011-R1b-SM-F649H
50-59 years, male
8.6
GTEX-1PIIG-0011-R1a-SM-F649P
30-39 years, male
8.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
8.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
8.6
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
8.5
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
8.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
8.5
GTEX-11NV4-0011-R1a-SM-GINAK
60-69 years, male
8.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
8.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
8.4
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
8.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
8.4
GTEX-11H98-0011-R1a-SM-GIN8O
50-59 years, male
8.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
8.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
8.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
8.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
8.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
8.1
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
8.1
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
8.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
8.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
8.0
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
8.0
GTEX-1LH75-0011-R1a-SM-F341Y
50-59 years, female
8.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
8.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
8.0
GTEX-ZZPT-0011-R1b-SM-GNINL
50-59 years, male
8.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
7.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
7.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
7.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
7.9
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
7.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
7.8
GTEX-1QMI2-0011-R1b-SM-F3K5Q
60-69 years, male
7.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
7.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
7.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
7.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
7.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
7.7
GTEX-11ZUS-0011-R1a-SM-GI4W7
30-39 years, male
7.6
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
7.6
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
7.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
7.6
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
7.6
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
7.5
GTEX-1LSVX-0011-R1a-SM-F3K5F
60-69 years, male
7.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
7.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
7.4
GTEX-1P4AB-0011-R1b-SM-F2TAV
50-59 years, male
7.4
GTEX-1RDX4-0011-R1a-SM-F3K5H
50-59 years, female
7.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
7.3
GTEX-15RJE-0011-R1b-SM-H6Q7N
40-49 years, male
7.3
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
7.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
7.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
7.1
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
7.1
GTEX-1JMQJ-0011-R1b-SM-F2T9P
50-59 years, male
7.1
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
7.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
6.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
6.9
GTEX-ZAK1-0011-R1a-SM-GRR1R
50-59 years, female
6.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
6.8
GTEX-1N2EE-0011-R1a-SM-F3K5K
60-69 years, male
6.8
GTEX-15SHU-0011-R1b-SM-H6Q7U
40-49 years, female
6.7
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
6.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
6.6
GTEX-15EO6-0011-R1b-SM-H7OGP
50-59 years, male
6.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
6.5
GTEX-12ZZY-0011-R1a-SM-GIN9E
60-69 years, male
6.2
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
6.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.1
Pig sample
Sample description
nTPM
Subiculum nTPM: 9.0
Samples: 4
Max nTPM: 9.3
Min nTPM: 8.6
Sample A
Female
8.6
Sample B
Female
9.2
Sample C
Male
9.3
Sample D
Male
8.9
Dorsal hippocampus nTPM: 8.5
Samples: 4
Max nTPM: 8.8
Min nTPM: 8.4
Sample A
Female
8.8
Sample B
Female
8.4
Sample C
Male
8.4
Sample D
Male
8.5
Entorhinal cortex nTPM: 8.5
Samples: 4
Max nTPM: 8.6
Min nTPM: 8.4
Sample A
Female
8.4
Sample B
Female
8.4
Sample C
Male
8.6
Sample D
Male
8.5
Ventral hippocampus nTPM: 9.1
Samples: 4
Max nTPM: 9.5
Min nTPM: 8.4
Sample A
Female
9.2
Sample B
Female
9.5
Sample C
Male
9.3
Sample D
Male
8.4
HIPPOCAMPAL FORMATION - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.3
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 10.8
Samples: 4
Max nTPM: 11.6
Min nTPM: 9.5
Sample A
Male
10.9
Sample B
Male
9.5
Sample C
Female
11.1
Sample D
Female
11.6
Hippocampal formation nTPM: 11.3
Samples: 4
Max nTPM: 13.6
Min nTPM: 9.1
Sample A
Male
9.9
Sample B
Male
9.1
Sample C
Female
12.5
Sample D
Female
13.6
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
