HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:55.4 nTPM
HPA Brain:26.0 nTPM
GTEx:55.4 nTPM
FANTOM5:11.3 Scaled Tags Per Million
Pig:21.6 nTPM
Mouse:9.1 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035082
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
1855 Male, age 76, left hemisphere 28.8
2148 Female, age 91, left hemisphere 28.3
2529 Female, age 94, left hemisphere 27.3
1898 Male, age 80, left hemisphere 25.4
1911 Female, age 85, right hemisphere 25.1
2621 Female, age 67, right hemisphere 21.3
Dentate gyrus
nTPM: 20.7
2010 Male, age 76, both hemispheres 25.3
2530 Female, age 94, left hemisphere 24.8
2246 Female, age 85, both hemispheres 20.3
2528 Male, age 74, both hemispheres 19.7
2531 Female, age 67, both hemispheres 18.7
1927 Female, age 91, both hemispheres 15.7
Entorhinal gyrus
nTPM: 19.1
2117 Female, age 91, right hemisphere 24.9
1787 Male, age 76, left hemisphere 21.7
2686 Male, age 75, right hemisphere 21.6
1938 Female, age 85, left hemisphere 17.0
2764 Male, age 80, right hemisphere 16.4
2613 Female, age 94, left hemisphere 12.8
Hippocampus, CA1
nTPM: 20.4
2527 Male, age 74, both hemispheres 24.3
2082 Female, age 91, right hemisphere 23.1
2045 Male, age 76, both hemispheres 20.3
1873 Female, age 85, both hemispheres 18.7
2749 Male, age 80, left hemisphere 15.3
Hippocampus, CA2
nTPM: 20.8
1963 Male, age 80, left hemisphere 23.1
2113 Female, age 91, right hemisphere 22.5
2249 Male, age 74, both hemispheres 22.4
2437 Female, age 94, left hemisphere 20.1
1940 Female, age 85, left hemisphere 19.8
1892 Male, age 76, both hemispheres 16.6
Hippocampus, CA3
nTPM: 20.9
2861 Female, age 67, both hemispheres 24.9
1867 Male, age 76, both hemispheres 22.3
1891 Female, age 85, both hemispheres 20.3
2137 Male, age 80, left hemisphere 19.7
2620 Female, age 94, left hemisphere 19.2
2436 Male, age 74, both hemispheres 19.0
Parahippocampal cortex
nTPM: 17.7
2018 Male, age 76, both hemispheres 25.1
1990 Female, age 91, right hemisphere 20.2
1850 Male, age 80, both hemispheres 18.2
2245 Female, age 91, both hemispheres 17.9
2532 Female, age 72, left hemisphere 17.4
2692 Male, age 74, both hemispheres 16.7
2622 Female, age 67, right hemisphere 16.6
1933 Female, age 85, both hemispheres 16.5
2250 Female, age 67, right hemisphere 16.3
2693 Female, age 94, both hemispheres 12.2
Perirhinal gyrus
nTPM: 17.4
1794 Male, age 80, right hemisphere 21.3
1847 Female, age 91, left hemisphere 18.1
1841 Female, age 85, right hemisphere 17.7
2521 Female, age 94, right hemisphere 16.5
2848 Male, age 76, right hemisphere 13.5
Subiculum
nTPM: 21.5
2729 Female, age 91, right hemisphere 26.6
2042 Male, age 76, both hemispheres 26.3
2619 Male, age 74, both hemispheres 26.0
1901 Male, age 80, both hemispheres 17.9
1977 Female, age 85, both hemispheres 17.4
2438 Female, age 94, left hemisphere 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 55.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.4
Samples: 255

Max nTPM: 144.5
Min nTPM: 20.3
Std nTPM: 23.5
Median nTPM: 50.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 144.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 143.2
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 135.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 123.8
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 123.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 120.5
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 120.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 119.4
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 118.7
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 118.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 107.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.3
FF:10169-103B7 60 years, female 11.4
FF:10153-102I9 76 years, female 11.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.6
Pig sample Sample description nTPM
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 24.3
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 24.3
Sample C Male 22.0
Sample D Male 23.7
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 25.6
Min nTPM: 10.9
Sample A Female 10.9
Sample B Female 19.2
Sample C Male 19.7
Sample D Male 25.6
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 28.2
Min nTPM: 17.9
Sample A Female 20.4
Sample B Female 17.9
Sample C Male 20.0
Sample D Male 28.2
Ventral hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 26.4
Min nTPM: 15.4
Sample A Female 21.3
Sample B Female 26.4
Sample C Male 15.4
Sample D Male 18.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.9
Sample A Male 9.7
Sample B Male 7.9
Sample C Female 8.8
Sample D Female 10.2
Hippocampal formation
nTPM: 7.2
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.5
Sample A Male 7.5
Sample B Male 8.0
Sample C Female 6.9
Sample D Female 6.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70194898 Antisense, RP_050517_02_A03, Mouse strain C57BL/6J (56 days, male) 0.0

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