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  • PCBP1
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:178.5 nTPM
HPA:129.6 nTPM
GTEx:178.5 nTPM
FANTOM5:367.8 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody CAB037113
Ovarian stroma cells Medium



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.6
overview
Female, age 64
Ovary sample 192
nTPM: 144.9
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 113.1
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 101
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 131.8
N/A
Female, age 16
Ovary sample 3663
nTPM: 143.8
N/A
Female, age 20
Ovary sample 3664
nTPM: 125.2
N/A
Female, age 32
Ovary sample 3665
nTPM: 147.5

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.5
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 178.5
Samples: 193

Max nTPM: 598.3
Min nTPM: 92.8
Std nTPM: 65.4
Median nTPM: 165.4
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 598.3
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 554.0
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 506.0
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 389.0
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 370.9
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 369.2
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 317.5
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 287.6
GTEX-15EOM-1526-SM-68723 20-29 years, female 276.5
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 255.5
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 253.7
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 249.3
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 244.6
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 243.5
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 239.4
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 237.2
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 237.0
GTEX-11I78-1926-SM-59878 50-59 years, female 234.6
GTEX-R55G-1526-SM-48FER 40-49 years, female 228.6
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 227.3
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 227.2
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 225.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 224.1
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 223.5
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 222.7
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 221.5
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 221.1
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 220.3
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 219.1
GTEX-14JG6-0626-SM-68716 30-39 years, female 218.4
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 217.3
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 216.4
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 212.4
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 206.8
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 204.9
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 204.4
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 204.4
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 203.4
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 203.1
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 201.0
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 199.3
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 198.8
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 197.6
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 195.4
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 195.3
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 195.1
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 195.1
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 194.2
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 193.9
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 192.0
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 190.8
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 190.7
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 190.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 190.2
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 188.7
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 188.5
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 188.2
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 187.9
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 187.9
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 187.7
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 184.9
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 184.5
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 183.1
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 182.8
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 182.7
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 182.1
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 182.0
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 181.6
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 180.8
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 180.1
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 179.2
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 178.4
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 178.0
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 178.0
GTEX-Q734-0726-SM-48TZP 40-49 years, female 176.7
GTEX-RU72-2226-SM-46MUE 50-59 years, female 176.5
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 176.3
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 176.1
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 175.8
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 174.4
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 173.8
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 172.1
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 171.9
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 170.7
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 169.5
GTEX-R45C-2526-SM-GRR28 60-69 years, female 169.2
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 169.0
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 168.3
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 168.3
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 168.1
GTEX-14PKV-1226-SM-6871T 20-29 years, female 167.7
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 167.6
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 167.4
GTEX-QCQG-1426-SM-48U22 50-59 years, female 167.2
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 167.1
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 167.0
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 165.4
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 165.1
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 164.7
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 164.3
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 163.1
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 162.8
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 162.7
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 162.0
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 161.8
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 161.2
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 160.3
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 160.1
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 159.5
GTEX-S341-0726-SM-4AD5R 40-49 years, female 159.3
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 159.2
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 158.7
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 158.6
GTEX-145ME-1226-SM-5MR87 40-49 years, female 158.5
GTEX-18D9A-0826-SM-718C1 30-39 years, female 158.3
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 156.9
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 156.5
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 156.5
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 156.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 155.9
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 155.6
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 155.6
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 155.4
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 154.1
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 153.7
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 153.5
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 153.4
GTEX-183WM-1926-SM-72D5F 70-79 years, female 152.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 152.7
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 152.1
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 152.0
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 151.5
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 151.4
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 151.2
GTEX-S32W-1226-SM-4AD67 50-59 years, female 150.7
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 150.4
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 150.1
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 149.6
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 149.5
GTEX-P78B-1926-SM-3P616 40-49 years, female 149.4
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 149.3
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 148.6
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 147.1
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 147.1
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 147.1
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 147.0
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 146.8
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 144.9
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 144.0
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 143.8
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 142.9
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 142.5
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 140.2
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 139.6
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 139.2
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 137.9
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 137.5
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 137.5
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 137.4
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 136.0
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 135.1
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 134.4
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 133.8
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 132.6
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 131.1
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 129.3
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 128.7
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 128.3
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 128.1
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 126.5
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 124.1
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 122.5
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 122.5
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 122.0
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 121.6
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 121.0
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 119.7
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 119.5
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 118.2
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 117.1
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 117.0
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 117.0
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 114.6
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 114.5
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 113.7
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 112.6
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 112.4
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 109.8
GTEX-14BIN-1426-SM-664NI 50-59 years, female 109.6
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 108.5
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 104.9
GTEX-QVJO-3126-SM-COH22 60-69 years, female 103.8
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 92.8
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

367.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 367.8
FF:10020-101D2 47,75,84 years, female 367.8

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