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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Medium
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:70.6 nTPM
HPA:26.7 nTPM
GTEx:70.6 nTPM
FANTOM5:89.9 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA023371Antibody HPA023863
Follicle cells LowMedium
Ovarian stroma cells Not detectedNot detected




OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.7
overview
Female, age 64
Ovary sample 192
nTPM: 24.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 34.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 23.2
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 23.4
N/A
Female, age 16
Ovary sample 3663
nTPM: 47.4
N/A
Female, age 20
Ovary sample 3664
nTPM: 14.1
N/A
Female, age 32
Ovary sample 3665
nTPM: 19.1

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.6
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 70.6
Samples: 193

Max nTPM: 198.6
Min nTPM: 22.6
Std nTPM: 31.9
Median nTPM: 63.7
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 198.6
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 192.7
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 181.2
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 173.6
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 170.2
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 152.6
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 141.7
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 135.2
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 132.7
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 130.8
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 126.2
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 119.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 114.5
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 114.1
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 113.0
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 111.6
GTEX-14PKV-1226-SM-6871T 20-29 years, female 110.1
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 109.8
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 108.1
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 107.4
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 107.1
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 105.7
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 104.7
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 104.6
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 104.5
GTEX-18D9A-0826-SM-718C1 30-39 years, female 103.4
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 103.3
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 102.5
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 99.5
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 98.6
GTEX-QCQG-1426-SM-48U22 50-59 years, female 98.5
GTEX-13SLX-2426-SM-664OM 50-59 years, female 98.4
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 98.3
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 97.6
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 96.8
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 96.8
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 94.4
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 94.0
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 93.3
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 93.1
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 91.6
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 91.5
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 90.1
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 89.6
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 89.2
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 88.8
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 88.5
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 88.5
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 87.9
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 87.8
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 86.8
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 85.9
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 85.7
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 84.6
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 84.5
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 84.5
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 84.1
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 84.0
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 83.1
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 83.0
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 82.7
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 82.6
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 80.9
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 79.7
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 79.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 78.5
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 78.4
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 78.3
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 77.4
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 76.6
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 76.2
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 75.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 75.4
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 73.2
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 72.9
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 72.5
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 71.4
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 71.0
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 70.7
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 70.6
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 70.4
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 69.9
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 69.8
GTEX-145ME-1226-SM-5MR87 40-49 years, female 69.7
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 69.1
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 68.9
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 68.3
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 67.9
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 67.7
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 67.1
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 66.4
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 66.4
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 65.8
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 65.7
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 64.7
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 64.5
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 63.7
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 63.6
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 63.5
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 63.3
GTEX-S32W-1226-SM-4AD67 50-59 years, female 63.2
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 63.1
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 62.9
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 61.8
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 61.8
GTEX-P78B-1926-SM-3P616 40-49 years, female 61.4
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 61.3
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 61.0
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 60.1
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 60.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 60.0
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 60.0
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 59.9
GTEX-14JG6-0626-SM-68716 30-39 years, female 59.3
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 59.3
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 58.4
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 58.2
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 57.9
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 57.9
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 57.5
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 57.1
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 56.4
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 55.8
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 55.2
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 54.9
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 54.7
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 54.6
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 54.4
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 53.2
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 52.8
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 52.6
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 52.4
GTEX-QVJO-3126-SM-COH22 60-69 years, female 52.3
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 52.2
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 52.2
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 52.1
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 51.8
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 51.4
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 51.3
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 51.0
GTEX-R55G-1526-SM-48FER 40-49 years, female 50.3
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 49.3
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 49.1
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 48.5
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 47.5
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 47.1
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 47.1
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 46.7
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 46.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 45.0
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 44.9
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 44.7
GTEX-11I78-1926-SM-59878 50-59 years, female 44.5
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 44.5
GTEX-183WM-1926-SM-72D5F 70-79 years, female 44.2
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 44.1
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 43.1
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 43.0
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 43.0
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 42.9
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 42.7
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 42.4
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 41.4
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 40.5
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 40.3
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 39.6
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 38.7
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 38.6
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 37.1
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 37.0
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 36.6
GTEX-R45C-2526-SM-GRR28 60-69 years, female 36.1
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 36.0
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 35.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 35.2
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 35.2
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 34.9
GTEX-Q734-0726-SM-48TZP 40-49 years, female 33.9
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 32.8
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 31.6
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 31.4
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 30.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 30.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 29.7
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 28.8
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 28.6
GTEX-15EOM-1526-SM-68723 20-29 years, female 28.0
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 27.8
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 26.9
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 26.5
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 25.1
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 24.6
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 22.6
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

89.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 89.9
FF:10020-101D2 47,75,84 years, female 89.9

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