HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:83.7 nTPM
HPA Brain:89.8 nTPM
GTEx:83.7 nTPM
FANTOM5:151.2 Scaled Tags Per Million
Pig:70.7 nTPM
Mouse:94.1 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037589Antibody HPA037590Antibody CAB009846
Glial cells LowLowLow
Neuronal cells Not detectedNot detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 89.8
Sample id Sample description nTPM
Hippocampus
nTPM: 81.8
2529 Female, age 94, left hemisphere 94.5
1898 Male, age 80, left hemisphere 93.4
1911 Female, age 85, right hemisphere 80.7
1855 Male, age 76, left hemisphere 76.7
2621 Female, age 67, right hemisphere 74.7
2148 Female, age 91, left hemisphere 70.9
Dentate gyrus
nTPM: 83.2
2530 Female, age 94, left hemisphere 134.5
2010 Male, age 76, both hemispheres 89.6
2246 Female, age 85, both hemispheres 76.3
2531 Female, age 67, both hemispheres 74.8
1927 Female, age 91, both hemispheres 62.1
2528 Male, age 74, both hemispheres 61.6
Entorhinal gyrus
nTPM: 89.8
2686 Male, age 75, right hemisphere 127.7
2117 Female, age 91, right hemisphere 104.6
1938 Female, age 85, left hemisphere 88.1
2764 Male, age 80, right hemisphere 79.2
1787 Male, age 76, left hemisphere 70.2
2613 Female, age 94, left hemisphere 68.9
Hippocampus, CA1
nTPM: 72.3
2749 Male, age 80, left hemisphere 79.5
1873 Female, age 85, both hemispheres 78.1
2082 Female, age 91, right hemisphere 73.2
2527 Male, age 74, both hemispheres 69.9
2045 Male, age 76, both hemispheres 61.0
Hippocampus, CA2
nTPM: 80.5
1963 Male, age 80, left hemisphere 104.3
2437 Female, age 94, left hemisphere 84.7
1940 Female, age 85, left hemisphere 77.4
1892 Male, age 76, both hemispheres 75.7
2113 Female, age 91, right hemisphere 73.2
2249 Male, age 74, both hemispheres 67.8
Hippocampus, CA3
nTPM: 68.7
1891 Female, age 85, both hemispheres 86.3
1867 Male, age 76, both hemispheres 82.4
2861 Female, age 67, both hemispheres 77.0
2137 Male, age 80, left hemisphere 69.0
2436 Male, age 74, both hemispheres 52.7
2620 Female, age 94, left hemisphere 44.7
Parahippocampal cortex
nTPM: 79.5
2692 Male, age 74, both hemispheres 89.9
2532 Female, age 72, left hemisphere 88.5
1933 Female, age 85, both hemispheres 85.9
2018 Male, age 76, both hemispheres 84.2
2622 Female, age 67, right hemisphere 83.9
1850 Male, age 80, both hemispheres 80.2
2245 Female, age 91, both hemispheres 79.6
1990 Female, age 91, right hemisphere 77.8
2250 Female, age 67, right hemisphere 63.3
2693 Female, age 94, both hemispheres 61.8
Perirhinal gyrus
nTPM: 69.4
1841 Female, age 85, right hemisphere 90.9
2848 Male, age 76, right hemisphere 75.5
1794 Male, age 80, right hemisphere 67.7
1847 Female, age 91, left hemisphere 60.7
2521 Female, age 94, right hemisphere 52.4
Subiculum
nTPM: 89.8
2438 Female, age 94, left hemisphere 109.9
2042 Male, age 76, both hemispheres 103.7
1901 Male, age 80, both hemispheres 99.5
1977 Female, age 85, both hemispheres 88.3
2729 Female, age 91, right hemisphere 73.3
2619 Male, age 74, both hemispheres 64.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 83.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.7
Samples: 255

Max nTPM: 305.5
Min nTPM: 28.3
Std nTPM: 44.5
Median nTPM: 71.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 305.5
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 289.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 272.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 264.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 241.5
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 211.3
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 207.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 189.7
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 182.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 180.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 178.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 151.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.2
FF:10153-102I9 76 years, female 186.2
FF:10169-103B7 60 years, female 116.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 70.7
Pig sample Sample description nTPM
Subiculum
nTPM: 70.7
Samples: 4

Max nTPM: 91.0
Min nTPM: 59.6
Sample A Female 91.0
Sample B Female 69.7
Sample C Male 62.3
Sample D Male 59.6
Dorsal hippocampus
nTPM: 64.4
Samples: 4

Max nTPM: 77.2
Min nTPM: 52.1
Sample A Female 77.2
Sample B Female 57.6
Sample C Male 70.5
Sample D Male 52.1
Entorhinal cortex
nTPM: 61.8
Samples: 4

Max nTPM: 70.5
Min nTPM: 58.3
Sample A Female 59.1
Sample B Female 70.5
Sample C Male 59.2
Sample D Male 58.3
Ventral hippocampus
nTPM: 55.6
Samples: 4

Max nTPM: 60.0
Min nTPM: 47.8
Sample A Female 58.7
Sample B Female 56.0
Sample C Male 47.8
Sample D Male 60.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 94.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.1
Samples: 4

Max nTPM: 103.4
Min nTPM: 81.0
Sample A Male 103.4
Sample B Male 97.6
Sample C Female 94.4
Sample D Female 81.0
Hippocampal formation
nTPM: 88.6
Samples: 4

Max nTPM: 94.4
Min nTPM: 86.1
Sample A Male 87.9
Sample B Male 86.1
Sample C Female 94.4
Sample D Female 86.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
2354 Antisense, RP_Baylor_102875, Mouse strain C57BL/6J (56 days, male) 1.2
2353 Antisense, RP_Baylor_102875, Mouse strain C57BL/6J (56 days, male) 1.0

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