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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
312.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 291.3
2586
Male, age 75, left hemisphere
355.2
2828
Female, age 72, unknown
309.4
2411
Female, age 72, unknown
306.8
1830
Male, age 51, unknown
298.8
1833
Male, age 53, unknown
296.3
1827
Male, age 72, unknown
295.1
2666
Male, age 74, left hemisphere
291.6
1870
Female, age 42, unknown
274.3
2019
Male, age 18, unknown
252.6
2219
Male, age 76, both hemispheres
232.9
Dorsal raphe nucleus nTPM: 208.0
2750
Male, age 76, both hemispheres
292.3
2016
Female, age 72, unknown
201.4
1828
Male, age 53, unknown
186.8
2298
Female, age 72, unknown
184.3
2047
Male, age 72, unknown
175.2
Inferior colliculus nTPM: 220.2
2849
Male, age 72, unknown
254.3
1848
Female, age 42, unknown
224.0
1890
Male, age 53, unknown
201.3
2097
Female, age 72, unknown
201.3
Median raphe nucleus nTPM: 200.0
2220
Male, age 76, midline
200.0
Periaquaductal grey, anterior nTPM: 312.5
1947
Male, age 18, unknown
333.1
2502
Female, age 75, unknown
326.8
1795
Male, age 51, unknown
277.7
Periaquaductal grey, dorsal nTPM: 188.0
2464
Female, age 72, unknown
240.5
1840
Male, age 53, unknown
187.0
1831
Male, age 72, unknown
185.2
2850
Male, age 76, both hemispheres
139.4
Periaquaductal grey, lateral nTPM: 193.3
2053
Male, age 18, unknown
228.6
2272
Male, age 74, both hemispheres
196.2
2140
Male, age 76, both hemispheres
155.2
Pretectal area nTPM: 243.4
2407
Male, age 75, both hemispheres
316.3
1815
Male, age 53, unknown
288.9
2316
Male, age 76, right hemisphere
280.2
2007
Male, age 72, unknown
268.8
2825
Male, age 18, unknown
261.0
1816
Male, age 51, unknown
249.6
1817
Female, age 42, unknown
247.9
1944
Female, age 72, unknown
245.0
2224
Female, age 72, unknown
187.6
2667
Female, age 75, unknown
173.7
2273
Male, age 74, both hemispheres
158.1
Red nucleus nTPM: 310.2
2584
Male, age 75, left hemisphere
363.9
2823
Male, age 76, right hemisphere
355.6
2725
Female, age 75, unknown
325.3
2588
Male, age 74, left hemisphere
323.3
1904
Male, age 53, unknown
319.8
1865
Male, age 51, unknown
318.1
2769
Male, age 72, unknown
302.3
2227
Male, age 72, unknown
298.3
2785
Male, age 18, unknown
294.1
2503
Female, age 72, unknown
293.9
1954
Female, age 42, unknown
265.9
1821
Female, age 72, unknown
261.5
Substantia nigra nTPM: 262.0
2590
Female, age 75, unknown
335.5
2583
Male, age 75, right hemisphere
319.7
1851
Male, age 51, unknown
271.4
2409
Female, age 72, unknown
262.0
1941
Male, age 53, unknown
254.7
2665
Male, age 74, both hemispheres
252.4
1916
Female, age 42, unknown
248.1
1889
Female, age 72, unknown
242.8
2241
Male, age 72, unknown
217.9
2699
Male, age 18, unknown
215.2
Superior colliculus nTPM: 281.6
1895
Male, age 76, right hemisphere
319.7
1995
Male, age 72, unknown
307.7
1913
Female, age 42, unknown
294.0
1796
Male, age 53, unknown
293.2
2261
Male, age 18, unknown
290.4
2664
Male, age 75, both hemispheres
282.2
1839
Male, age 51, unknown
271.1
2668
Female, age 75, unknown
269.1
2587
Male, age 74, left hemisphere
248.9
2087
Female, age 72, unknown
239.3
Ventral tegmental area nTPM: 238.4
2410
Female, age 72, unknown
292.4
2218
Male, age 76, both hemispheres
244.8
1942
Male, age 51, unknown
236.1
1915
Female, age 42, unknown
233.3
2223
Female, age 72, unknown
212.3
2021
Male, age 53, unknown
211.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
94.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 94.7
Samples: 183
Max nTPM: 297.7
Min nTPM: 25.7
Std nTPM: 42.1
Median nTPM: 83.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
297.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
267.2
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
261.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
216.9
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
186.7
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
184.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
178.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
174.4
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
170.3
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
162.6
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
161.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
158.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
158.7
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
158.3
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
155.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
152.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
145.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
143.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
142.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
141.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
141.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
138.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
135.9
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
133.8
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
132.5
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
131.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
130.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
129.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
129.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
128.6
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
128.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
127.6
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
126.4
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
126.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
125.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
125.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
125.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
124.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
124.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
124.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
123.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
121.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
120.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
120.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
119.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
118.8
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
117.8
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
116.8
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
115.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
115.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
115.1
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
115.0
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
113.3
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
112.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
110.7
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
109.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
107.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
106.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
105.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
105.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
104.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
104.1
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
103.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
103.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
102.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
101.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
100.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
100.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
98.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
98.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
96.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
96.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
96.4
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
95.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
94.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
92.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
92.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
91.1
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
90.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
89.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
89.0
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
87.9
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
86.3
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
85.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
85.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
84.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
84.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
84.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
84.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
84.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
84.1
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
83.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
82.9
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
82.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
82.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
82.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
81.5
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
81.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
81.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
81.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
80.7
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
80.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
79.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
79.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
79.1
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
79.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
77.5
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
77.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
76.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
76.6
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
76.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
75.8
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
75.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
75.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
75.4
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
75.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
74.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
74.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
74.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
74.0
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
72.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
72.7
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
72.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
72.4
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
71.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
70.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
69.8
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
69.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
69.3
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
69.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
69.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
68.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
68.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
68.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
68.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
67.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
67.6
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
67.6
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
67.6
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
66.7
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
66.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
66.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
66.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
65.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
65.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
65.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
64.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
64.0
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
63.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
63.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
62.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
61.6
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
61.6
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
61.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
60.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
60.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
60.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
59.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
58.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
57.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
56.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
55.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
54.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
54.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
53.7
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
52.8
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
50.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
50.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
48.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
48.4
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
48.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
47.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
44.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
42.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
41.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
38.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
38.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
36.6
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
33.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
31.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
28.1
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
27.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
25.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.5
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 65.4
Samples: 4
Max nTPM: 81.3
Min nTPM: 40.6
Sample A
Female
81.3
Sample B
Female
40.6
Sample C
Male
64.9
Sample D
Male
74.9
Midbrain nTPM: 75.5
Samples: 4
Max nTPM: 86.5
Min nTPM: 68.4
Sample A
Female
76.4
Sample B
Female
70.6
Sample C
Male
86.5
Sample D
Male
68.4
Periaqueductal gray nTPM: 64.0
Samples: 3
Max nTPM: 68.2
Min nTPM: 60.6
Sample B
Female
68.2
Sample C
Male
63.2
Sample D
Male
60.6
Superior colliculi nTPM: 67.1
Samples: 4
Max nTPM: 82.5
Min nTPM: 33.4
Sample A
Female
75.5
Sample B
Female
33.4
Sample C
Male
76.9
Sample D
Male
82.5
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
220.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 220.6
Samples: 4
Max nTPM: 231.4
Min nTPM: 208.8
Sample A
Male
208.8
Sample B
Male
219.0
Sample C
Female
231.4
Sample D
Female
223.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.