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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:10.7 nTPM
HPA Brain:38.8 nTPM
GTEx:10.7 nTPM
Pig:8.1 nTPM
Mouse:15.8 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 33.2
1961 Female, age 42, unknown 37.8
2226 Male, age 75, left hemisphere 28.5
Dorsomedial nucleus
nTPM: 38.2
1989 Male, age 62, unknown 40.4
2017 Female, age 42, unknown 39.1
2041 Female, age 72, unknown 35.2
Lateral hypothalamic area
nTPM: 34.1
2271 Male, age 75, both hemispheres 40.2
1791 Male, age 80, right hemisphere 35.6
2412 Male, age 62, unknown 35.6
2228 Male, age 66, unknown 25.1
Mammillary body
nTPM: 32.6
1834 Female, age 42, unknown 36.0
2413 Male, age 66, unknown 33.7
1948 Female, age 72, unknown 33.2
1945 Male, age 80, right hemisphere 32.8
1923 Female, age 72, unknown 27.2
Paraventricular nucleus
nTPM: 29.6
2700 Male, age 62, unknown 29.6
Preoptic area
nTPM: 33.5
1861 Female, age 42, unknown 36.6
2414 Female, age 72, unknown 34.1
1907 Male, age 80, right hemisphere 29.6
Supraoptic nucleus
nTPM: 38.1
2835 Female, age 72, unknown 41.3
2043 Male, age 62, unknown 39.0
1894 Female, age 72, unknown 34.2
Ventromedial nucleus
nTPM: 38.8
1982 Female, age 72, unknown 41.5
1822 Female, age 42, unknown 36.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 10.7
Samples: 257

Max nTPM: 18.6
Min nTPM: 4.8
Std nTPM: 2.1
Median nTPM: 10.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 18.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 17.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 17.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 17.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 16.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 15.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 15.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 15.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 15.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 14.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 14.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 14.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 14.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 14.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 14.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 14.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 14.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 14.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 14.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 14.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 14.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 14.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 13.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 13.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 13.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 13.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 13.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 13.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 13.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 13.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 13.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 13.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 13.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 13.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 13.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 12.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 12.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 12.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 12.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 12.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 12.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 12.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 12.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 12.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 12.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 12.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 12.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 12.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 12.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 12.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 12.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 12.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 12.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 12.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 12.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 12.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 12.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 12.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 12.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 12.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 12.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 12.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 11.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 11.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 11.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 11.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 11.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 11.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 11.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 11.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 11.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 11.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 11.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 11.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 11.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 11.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 11.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 11.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 11.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 11.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 11.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 11.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 11.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 11.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 11.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 11.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 11.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 11.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 11.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 11.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 11.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 11.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 11.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 11.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 11.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 11.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 11.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 11.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 11.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 11.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 11.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 11.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 11.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 11.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 11.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 11.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 10.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 10.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 10.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 10.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 10.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 10.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 10.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 10.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 10.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 10.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 10.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 10.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 10.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 10.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 10.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 10.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 10.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 10.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 10.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 10.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 10.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 10.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 10.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 10.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 10.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 10.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 10.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 10.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 10.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 10.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 10.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 10.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 10.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 10.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 10.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 10.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 10.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 10.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 10.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 10.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 10.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 10.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 10.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 10.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 10.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 10.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 10.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 10.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 10.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 10.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 10.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 10.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 10.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 10.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 9.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 9.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 9.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 9.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 9.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 9.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 9.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 9.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 9.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 9.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 9.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 9.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 9.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 9.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 9.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 9.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 9.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 9.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 9.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 9.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 9.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 9.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 9.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 9.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 9.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 9.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 9.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 9.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 9.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 9.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 9.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 9.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 9.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 9.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 9.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 9.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 9.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 9.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 9.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 9.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 9.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 9.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 9.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 9.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 9.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 8.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 8.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 8.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 8.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 8.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 8.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 8.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 8.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 8.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 8.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 8.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 8.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 8.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 8.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 8.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 8.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 8.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 8.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 8.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 8.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 8.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 8.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 8.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 8.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 8.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 8.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 8.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 8.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 8.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 7.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 7.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 7.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 7.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 7.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 7.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 7.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 7.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 7.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 7.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 7.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 7.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 7.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 7.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 7.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 7.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 6.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 6.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 6.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 6.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 5.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 4.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 8.1
Samples: 4

Max nTPM: 9.7
Min nTPM: 6.6
Sample A Female 9.7
Sample B Female 8.0
Sample C Male 8.1
Sample D Male 6.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 15.8
Samples: 4

Max nTPM: 16.5
Min nTPM: 15.3
Sample A Male 15.4
Sample B Male 16.0
Sample C Female 16.5
Sample D Female 15.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
74059211 Antisense, RP_051121_03_A10, Mouse strain C57BL/6J (56 days, male) 0.0

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