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ARPP21
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • ARPP21
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

105.535
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:24.9 nTPM
HPA Brain:96.8 nTPM
GTEx:24.9 nTPM
Pig:22.1 nTPM
Mouse:12.7 nTPM
Allen mouse:3.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA017303
Hypothalamus mean intensity 105.535
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 50.722
Mammillary nucleus 18.917
Periventricular hypothalamic nucleus 92.152
Supraoptic nucleus 41.375
Tuberal nucleus 81.070
Ventral tuberomammillary nucleus 43.456
Lateral preoptic area 31.950
Medial preoptic area 11.623
Suprachiasmatic nucleus 74.069
Paraventricular hypothalamic nucleus 34.506
Anterior hypothalamic area, central 41.390
Ventral medial hypothalamic nucleus 57.265
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 105.535
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 31.482
Dorsal medial hypothalamic nucleus 35.247
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 42.6
1961 Female, age 42, unknown 49.6
2226 Male, age 75, left hemisphere 35.5
Dorsomedial nucleus
nTPM: 38.2
1989 Male, age 62, unknown 43.6
2017 Female, age 42, unknown 38.8
2041 Female, age 72, unknown 32.1
Lateral hypothalamic area
nTPM: 47.3
1791 Male, age 80, right hemisphere 50.3
2271 Male, age 75, both hemispheres 50.3
2228 Male, age 66, unknown 48.4
2412 Male, age 62, unknown 40.3
Mammillary body
nTPM: 96.8
1923 Female, age 72, unknown 151.1
1834 Female, age 42, unknown 100.3
1948 Female, age 72, unknown 86.7
2413 Male, age 66, unknown 82.0
1945 Male, age 80, right hemisphere 63.9
Paraventricular nucleus
nTPM: 44.8
2700 Male, age 62, unknown 44.8
Preoptic area
nTPM: 41.4
1861 Female, age 42, unknown 45.9
2414 Female, age 72, unknown 40.1
1907 Male, age 80, right hemisphere 38.2
Supraoptic nucleus
nTPM: 30.7
1894 Female, age 72, unknown 36.8
2835 Female, age 72, unknown 35.3
2043 Male, age 62, unknown 20.0
Ventromedial nucleus
nTPM: 65.5
1982 Female, age 72, unknown 79.2
1822 Female, age 42, unknown 51.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 24.9
Samples: 257

Max nTPM: 1170.3
Min nTPM: 1.2
Std nTPM: 114.3
Median nTPM: 6.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1170.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1047.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 942.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 200.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 129.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 116.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 106.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 102.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 102.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 99.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 88.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 78.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 75.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 58.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 45.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 43.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 43.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 42.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 35.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 35.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 32.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 31.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 29.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 28.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 25.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 23.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 23.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 22.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 21.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 20.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 19.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 19.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 19.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 18.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 17.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 17.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 17.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 17.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 16.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 16.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 15.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 15.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 14.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 14.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 13.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 13.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 13.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 12.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 12.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 12.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 12.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 12.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 11.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 11.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 11.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 11.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 11.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 11.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 11.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 11.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 10.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 10.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 10.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 10.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 10.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 10.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 10.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 10.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 10.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 10.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 9.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 9.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 9.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 9.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 9.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 9.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 9.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 9.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 9.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 9.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 9.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 9.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 9.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 9.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 9.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 9.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 9.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 9.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 8.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 8.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 8.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 8.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 8.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 8.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 8.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 8.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 7.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 7.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 7.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 7.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 7.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 7.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 7.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 7.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 7.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 7.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 7.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 7.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 7.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 7.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 7.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 7.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 7.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 6.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 6.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 6.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 6.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 6.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 6.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 6.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 6.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 6.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 6.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 6.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 6.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 6.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 6.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 6.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 6.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 6.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 6.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 6.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 6.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 6.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 6.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 6.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 6.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 6.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 6.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 6.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 6.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 6.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 6.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 6.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 6.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 5.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 5.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 5.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 5.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 5.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 5.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 5.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 5.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 5.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 5.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 5.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 5.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 5.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 5.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 5.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 5.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 5.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 5.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 5.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 5.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 5.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 5.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 5.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 5.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 5.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 5.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 5.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 5.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 5.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 5.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 5.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 5.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 5.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 5.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 4.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 4.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 4.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 4.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 4.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 4.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 4.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 4.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 4.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 4.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 4.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 4.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 4.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 4.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 4.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 4.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 4.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 4.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 4.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 4.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 4.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 4.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 4.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 4.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 4.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 4.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 4.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 4.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 4.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 4.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 4.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 4.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 4.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 4.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 4.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 4.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 4.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 3.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 3.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 3.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 3.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 3.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 3.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 3.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 3.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 3.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 3.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 3.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 3.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 3.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 3.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 3.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 3.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 3.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 3.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 3.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 3.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 3.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 3.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 3.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 3.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 3.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 2.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 2.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 2.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 2.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 2.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 2.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 2.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 2.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 2.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 2.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 2.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 22.1
Samples: 4

Max nTPM: 31.9
Min nTPM: 15.5
Sample A Female 23.6
Sample B Female 31.9
Sample C Male 17.3
Sample D Male 15.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 12.7
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.5
Sample A Male 15.2
Sample B Male 13.5
Sample C Female 10.5
Sample D Female 11.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.1
79567762 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 6.9
79677353 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 2.6
71587781 Antisense, RP_050725_02_D09, Mouse strain C57BL/6J (56 days, male) 1.3
68148752 Antisense, RP_041116_02_B04, Mouse strain C57BL/6J (56 days, male) 0.9

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