HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:48.6 nTPM
HPA Brain:76.6 nTPM
GTEx:48.6 nTPM
FANTOM5:37.5 Scaled Tags Per Million
Pig:38.8 nTPM
Mouse:72.4 nTPM
Allen mouse:3.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062871
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 76.6
Sample id Sample description nTPM
Hippocampus
nTPM: 73.9
2621 Female, age 67, right hemisphere 79.3
2148 Female, age 91, left hemisphere 78.3
1855 Male, age 76, left hemisphere 77.2
1898 Male, age 80, left hemisphere 73.5
1911 Female, age 85, right hemisphere 68.6
2529 Female, age 94, left hemisphere 66.5
Dentate gyrus
nTPM: 73.3
2530 Female, age 94, left hemisphere 89.6
2531 Female, age 67, both hemispheres 74.0
1927 Female, age 91, both hemispheres 73.1
2010 Male, age 76, both hemispheres 71.2
2528 Male, age 74, both hemispheres 67.9
2246 Female, age 85, both hemispheres 63.9
Entorhinal gyrus
nTPM: 67.5
2117 Female, age 91, right hemisphere 73.6
2686 Male, age 75, right hemisphere 72.9
2613 Female, age 94, left hemisphere 72.5
2764 Male, age 80, right hemisphere 65.2
1787 Male, age 76, left hemisphere 61.5
1938 Female, age 85, left hemisphere 59.2
Hippocampus, CA1
nTPM: 73.0
2749 Male, age 80, left hemisphere 91.3
1873 Female, age 85, both hemispheres 69.0
2082 Female, age 91, right hemisphere 68.7
2527 Male, age 74, both hemispheres 68.1
2045 Male, age 76, both hemispheres 67.9
Hippocampus, CA2
nTPM: 73.9
1963 Male, age 80, left hemisphere 85.8
1892 Male, age 76, both hemispheres 84.7
2437 Female, age 94, left hemisphere 73.8
2113 Female, age 91, right hemisphere 70.8
2249 Male, age 74, both hemispheres 65.1
1940 Female, age 85, left hemisphere 63.3
Hippocampus, CA3
nTPM: 76.6
2861 Female, age 67, both hemispheres 93.0
2137 Male, age 80, left hemisphere 88.3
2620 Female, age 94, left hemisphere 83.3
1867 Male, age 76, both hemispheres 68.2
2436 Male, age 74, both hemispheres 68.0
1891 Female, age 85, both hemispheres 58.4
Parahippocampal cortex
nTPM: 66.9
2622 Female, age 67, right hemisphere 86.9
2245 Female, age 91, both hemispheres 74.4
2250 Female, age 67, right hemisphere 68.5
1933 Female, age 85, both hemispheres 66.9
2532 Female, age 72, left hemisphere 66.3
2693 Female, age 94, both hemispheres 65.7
2692 Male, age 74, both hemispheres 63.5
1990 Female, age 91, right hemisphere 59.2
1850 Male, age 80, both hemispheres 59.0
2018 Male, age 76, both hemispheres 58.3
Perirhinal gyrus
nTPM: 62.3
2521 Female, age 94, right hemisphere 64.9
2848 Male, age 76, right hemisphere 63.7
1847 Female, age 91, left hemisphere 62.9
1794 Male, age 80, right hemisphere 61.3
1841 Female, age 85, right hemisphere 58.6
Subiculum
nTPM: 69.2
2438 Female, age 94, left hemisphere 89.7
1901 Male, age 80, both hemispheres 69.2
2619 Male, age 74, both hemispheres 67.3
2729 Female, age 91, right hemisphere 66.2
2042 Male, age 76, both hemispheres 64.9
1977 Female, age 85, both hemispheres 58.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 48.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.6
Samples: 255

Max nTPM: 161.3
Min nTPM: 22.2
Std nTPM: 15.7
Median nTPM: 45.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 161.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 108.8
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 85.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 85.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 85.0
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 83.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 82.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 80.9
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 78.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 78.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 78.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 37.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.5
FF:10153-102I9 76 years, female 46.0
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 38.8
Pig sample Sample description nTPM
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 48.0
Min nTPM: 30.1
Sample A Female 48.0
Sample B Female 30.1
Sample C Male 35.1
Sample D Male 30.8
Dorsal hippocampus
nTPM: 35.6
Samples: 4

Max nTPM: 44.1
Min nTPM: 25.9
Sample A Female 44.1
Sample B Female 33.5
Sample C Male 38.9
Sample D Male 25.9
Entorhinal cortex
nTPM: 38.8
Samples: 4

Max nTPM: 42.0
Min nTPM: 36.3
Sample A Female 40.1
Sample B Female 36.3
Sample C Male 42.0
Sample D Male 36.9
Ventral hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 50.8
Min nTPM: 25.1
Sample A Female 36.6
Sample B Female 25.1
Sample C Male 50.8
Sample D Male 36.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 72.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.3
Samples: 4

Max nTPM: 75.3
Min nTPM: 68.4
Sample A Male 68.4
Sample B Male 70.4
Sample C Female 71.2
Sample D Female 75.3
Hippocampal formation
nTPM: 72.4
Samples: 4

Max nTPM: 81.4
Min nTPM: 65.4
Sample A Male 65.4
Sample B Male 73.7
Sample C Female 68.9
Sample D Female 81.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
68797631 Antisense, RP_050210_02_G10, Mouse strain C57BL/6J (56 days, male) 3.2
75651149 Antisense, RP_060518_01_A03, Mouse strain C57BL/6J (56 days, male) 3.0

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