HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:16.3 nTPM
HPA Brain:11.4 nTPM
GTEx:16.3 nTPM
FANTOM5:70.6 Scaled Tags Per Million
Pig:37.3 nTPM
Mouse:16.0 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026842Antibody HPA027930
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
1898 Male, age 80, left hemisphere 13.8
1855 Male, age 76, left hemisphere 13.0
2529 Female, age 94, left hemisphere 12.6
2621 Female, age 67, right hemisphere 10.6
1911 Female, age 85, right hemisphere 9.3
2148 Female, age 91, left hemisphere 8.9
Dentate gyrus
nTPM: 8.9
2530 Female, age 94, left hemisphere 12.3
2010 Male, age 76, both hemispheres 11.3
2246 Female, age 85, both hemispheres 9.2
2531 Female, age 67, both hemispheres 7.2
1927 Female, age 91, both hemispheres 6.9
2528 Male, age 74, both hemispheres 6.5
Entorhinal gyrus
nTPM: 8.0
2117 Female, age 91, right hemisphere 11.4
1787 Male, age 76, left hemisphere 10.0
2764 Male, age 80, right hemisphere 8.5
2686 Male, age 75, right hemisphere 6.2
2613 Female, age 94, left hemisphere 6.1
1938 Female, age 85, left hemisphere 6.0
Hippocampus, CA1
nTPM: 8.9
2527 Male, age 74, both hemispheres 14.5
1873 Female, age 85, both hemispheres 10.0
2045 Male, age 76, both hemispheres 7.7
2749 Male, age 80, left hemisphere 6.3
2082 Female, age 91, right hemisphere 6.2
Hippocampus, CA2
nTPM: 9.8
2249 Male, age 74, both hemispheres 11.0
2113 Female, age 91, right hemisphere 10.6
1940 Female, age 85, left hemisphere 9.9
1963 Male, age 80, left hemisphere 9.4
1892 Male, age 76, both hemispheres 9.1
2437 Female, age 94, left hemisphere 8.9
Hippocampus, CA3
nTPM: 8.7
2436 Male, age 74, both hemispheres 12.3
1867 Male, age 76, both hemispheres 9.8
1891 Female, age 85, both hemispheres 9.1
2861 Female, age 67, both hemispheres 8.1
2620 Female, age 94, left hemisphere 6.7
2137 Male, age 80, left hemisphere 6.4
Parahippocampal cortex
nTPM: 8.5
2245 Female, age 91, both hemispheres 10.6
1990 Female, age 91, right hemisphere 10.5
2250 Female, age 67, right hemisphere 10.2
2018 Male, age 76, both hemispheres 10.1
2693 Female, age 94, both hemispheres 7.7
1850 Male, age 80, both hemispheres 7.5
2622 Female, age 67, right hemisphere 7.5
2692 Male, age 74, both hemispheres 7.4
1933 Female, age 85, both hemispheres 6.9
2532 Female, age 72, left hemisphere 6.3
Perirhinal gyrus
nTPM: 8.7
1847 Female, age 91, left hemisphere 9.9
2521 Female, age 94, right hemisphere 9.2
1794 Male, age 80, right hemisphere 8.7
1841 Female, age 85, right hemisphere 8.1
2848 Male, age 76, right hemisphere 7.5
Subiculum
nTPM: 9.0
2438 Female, age 94, left hemisphere 13.6
2619 Male, age 74, both hemispheres 9.0
2042 Male, age 76, both hemispheres 8.9
2729 Female, age 91, right hemisphere 8.7
1977 Female, age 85, both hemispheres 7.9
1901 Male, age 80, both hemispheres 6.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 255

Max nTPM: 34.4
Min nTPM: 4.2
Std nTPM: 4.8
Median nTPM: 16.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 34.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 28.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 27.2
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 27.2
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 26.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 26.0
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 26.0
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 25.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 25.4
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 25.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 70.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.6
FF:10153-102I9 76 years, female 75.8
FF:10169-103B7 60 years, female 65.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 37.3
Pig sample Sample description nTPM
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 40.3
Min nTPM: 33.0
Sample A Female 36.3
Sample B Female 34.5
Sample C Male 33.0
Sample D Male 40.3
Dorsal hippocampus
nTPM: 36.8
Samples: 4

Max nTPM: 39.6
Min nTPM: 33.9
Sample A Female 34.9
Sample B Female 33.9
Sample C Male 38.6
Sample D Male 39.6
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 38.9
Min nTPM: 33.7
Sample A Female 38.3
Sample B Female 38.2
Sample C Male 33.7
Sample D Male 38.9
Ventral hippocampus
nTPM: 35.0
Samples: 4

Max nTPM: 41.3
Min nTPM: 28.1
Sample A Female 41.3
Sample B Female 38.2
Sample C Male 28.1
Sample D Male 32.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 14.8
Min nTPM: 13.1
Sample A Male 13.9
Sample B Male 14.8
Sample C Female 13.4
Sample D Female 13.1
Hippocampal formation
nTPM: 16.0
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.2
Sample A Male 15.6
Sample B Male 18.2
Sample C Female 16.8
Sample D Female 13.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68910980 Antisense, RP_050118_03_A12, Mouse strain C57BL/6J (56 days, male) 0.1
71022864 Antisense, RP_050719_01_F10, Mouse strain C57BL/6J (56 days, male) 0.0

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