We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SEZ6L2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SEZ6L2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:73.6 nTPM
HPA Brain:236.4 nTPM
GTEx:73.6 nTPM
Pig:91.2 nTPM
Mouse:203.2 nTPM
Allen mouse:21.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 236.4
2226 Male, age 75, left hemisphere 336.9
1961 Female, age 42, unknown 135.9
Dorsomedial nucleus
nTPM: 118.2
1989 Male, age 62, unknown 140.5
2041 Female, age 72, unknown 115.0
2017 Female, age 42, unknown 99.1
Lateral hypothalamic area
nTPM: 172.4
2228 Male, age 66, unknown 259.7
2271 Male, age 75, both hemispheres 179.0
1791 Male, age 80, right hemisphere 144.9
2412 Male, age 62, unknown 106.2
Mammillary body
nTPM: 105.0
1923 Female, age 72, unknown 163.5
2413 Male, age 66, unknown 114.8
1948 Female, age 72, unknown 92.0
1834 Female, age 42, unknown 82.6
1945 Male, age 80, right hemisphere 72.1
Paraventricular nucleus
nTPM: 110.2
2700 Male, age 62, unknown 110.2
Preoptic area
nTPM: 109.4
1907 Male, age 80, right hemisphere 155.4
1861 Female, age 42, unknown 91.3
2414 Female, age 72, unknown 81.6
Supraoptic nucleus
nTPM: 89.1
2835 Female, age 72, unknown 119.0
1894 Female, age 72, unknown 77.2
2043 Male, age 62, unknown 71.2
Ventromedial nucleus
nTPM: 133.7
1982 Female, age 72, unknown 150.3
1822 Female, age 42, unknown 117.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 73.6
Samples: 257

Max nTPM: 142.0
Min nTPM: 11.6
Std nTPM: 31.2
Median nTPM: 74.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 142.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 139.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 138.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 136.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 135.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 132.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 131.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 130.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 127.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 127.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 126.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 123.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 122.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 122.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 122.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 120.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 120.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 119.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 118.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 117.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 117.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 117.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 117.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 116.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 113.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 113.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 113.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 112.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 112.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 112.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 111.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 110.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 110.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 109.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 109.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 109.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 108.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 108.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 108.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 108.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 106.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 106.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 106.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 105.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 105.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 105.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 104.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 104.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 104.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 103.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 103.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 103.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 101.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 101.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 101.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 100.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 100.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 100.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 100.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 100.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 100.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 99.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 99.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 99.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 99.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 98.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 97.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 97.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 97.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 96.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 95.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 95.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 95.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 95.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 94.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 94.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 94.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 93.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 93.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 92.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 91.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 91.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 91.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 91.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 90.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 90.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 89.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 89.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 89.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 89.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 88.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 88.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 88.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 87.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 87.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 86.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 86.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 85.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 84.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 84.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 84.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 84.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 83.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 83.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 82.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 82.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 82.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 80.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 79.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 79.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 79.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 79.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 79.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 79.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 78.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 78.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 78.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 78.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 77.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 77.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 77.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 76.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 76.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 76.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 76.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 75.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 75.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 74.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 74.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 74.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 74.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 73.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 73.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 73.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 72.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 72.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 71.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 71.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 71.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 71.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 70.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 69.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 68.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 68.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 68.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 68.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 68.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 68.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 68.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 67.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 66.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 66.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 65.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 64.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 64.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 64.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 64.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 64.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 64.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 63.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 63.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 63.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 62.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 61.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 60.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 60.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 59.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 57.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 57.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 57.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 57.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 56.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 56.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 55.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 55.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 55.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 54.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 54.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 54.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 53.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 52.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 51.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 51.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 51.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 50.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 50.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 50.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 49.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 49.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 49.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 49.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 49.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 48.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 48.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 47.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 46.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 46.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 45.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 45.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 45.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 45.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 45.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 45.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 45.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 44.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 43.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 43.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 43.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 42.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 41.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 41.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 40.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 40.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 39.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 39.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 39.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 38.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 37.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 36.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 36.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 36.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 35.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 34.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 33.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 32.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 31.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 31.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 29.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 29.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 28.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 28.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 27.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 27.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 27.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 27.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 26.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 26.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 25.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 25.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 25.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 24.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 24.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 24.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 23.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 22.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 22.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 20.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 17.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 16.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 16.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 16.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 14.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 14.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 14.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 13.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 11.6
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 91.3
Samples: 4

Max nTPM: 113.4
Min nTPM: 78.0
Sample A Female 113.4
Sample B Female 78.0
Sample C Male 88.5
Sample D Male 85.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

203.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 203.2
Samples: 4

Max nTPM: 216.3
Min nTPM: 189.6
Sample A Male 209.0
Sample B Male 216.3
Sample C Female 197.9
Sample D Female 189.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 21.4
1408 Antisense, RP_040625_02_B11, Mouse strain C57BL/6J (56 days, male) 21.4
1407 Antisense, RP_040625_02_B11, Mouse strain C57BL/6J (56 days, male) 5.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo