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MARCKSL1
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  • MARCKSL1
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:378.4 nTPM
HPA:293.8 nTPM
GTEx:378.4 nTPM
FANTOM5:481.8 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA030528Antibody CAB020787
Ovarian stroma cells HighMedium





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

293.8
overview
Female, age 64
Ovary sample 192
nTPM: 244.4
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 244
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 269.5
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 242.5
N/A
Female, age 16
Ovary sample 3663
nTPM: 261.1
N/A
Female, age 20
Ovary sample 3664
nTPM: 278
N/A
Female, age 32
Ovary sample 3665
nTPM: 517.3

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

378.4
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 378.4
Samples: 193

Max nTPM: 1006.1
Min nTPM: 64.4
Std nTPM: 199.4
Median nTPM: 346.2
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 1006.1
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 999.3
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 992.0
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 964.5
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 939.4
GTEX-11I78-1926-SM-59878 50-59 years, female 918.6
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 806.6
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 804.1
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 803.9
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 793.4
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 785.0
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 781.8
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 672.1
GTEX-S341-0726-SM-4AD5R 40-49 years, female 667.2
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 666.3
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 664.8
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 655.6
GTEX-QCQG-1426-SM-48U22 50-59 years, female 640.8
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 638.1
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 628.2
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 627.7
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 620.7
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 614.8
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 596.6
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 592.1
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 590.3
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 588.6
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 580.4
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 579.8
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 576.9
GTEX-13SLX-2426-SM-664OM 50-59 years, female 576.3
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 561.1
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 559.7
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 558.0
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 556.6
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 556.5
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 550.2
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 548.6
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 544.7
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 543.7
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 541.7
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 537.9
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 534.8
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 521.5
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 517.0
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 515.7
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 508.5
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 503.2
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 502.0
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 495.4
GTEX-RU72-2226-SM-46MUE 50-59 years, female 493.0
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 490.8
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 486.2
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 486.2
GTEX-15EOM-1526-SM-68723 20-29 years, female 484.4
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 482.9
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 478.9
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 476.1
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 467.9
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 464.3
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 462.0
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 460.7
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 452.7
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 449.9
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 443.8
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 433.6
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 427.3
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 422.2
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 419.9
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 413.0
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 407.8
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 406.7
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 402.4
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 402.1
GTEX-14PKV-1226-SM-6871T 20-29 years, female 392.1
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 388.1
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 380.8
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 377.0
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 375.8
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 374.0
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 367.0
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 364.0
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 362.8
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 360.7
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 359.6
GTEX-145ME-1226-SM-5MR87 40-49 years, female 356.4
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 354.8
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 354.1
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 352.2
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 351.7
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 349.8
GTEX-P78B-1926-SM-3P616 40-49 years, female 348.7
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 348.0
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 347.8
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 347.2
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 346.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 346.2
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 345.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 337.2
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 335.4
GTEX-QVJO-3126-SM-COH22 60-69 years, female 324.7
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 324.1
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 323.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 320.6
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 313.8
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 313.7
GTEX-R45C-2526-SM-GRR28 60-69 years, female 311.2
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 310.1
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 308.5
GTEX-14JG6-0626-SM-68716 30-39 years, female 307.0
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 304.6
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 304.0
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 302.0
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 300.0
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 298.3
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 291.2
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 290.2
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 280.3
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 276.6
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 276.1
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 274.1
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 273.7
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 273.3
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 269.0
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 267.9
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 265.7
GTEX-18D9A-0826-SM-718C1 30-39 years, female 264.3
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 262.1
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 259.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 256.9
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 254.9
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 254.2
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 253.5
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 250.8
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 244.6
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 241.4
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 237.8
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 237.2
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 235.0
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 234.7
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 234.2
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 233.2
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 230.4
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 228.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 225.0
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 224.3
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 222.5
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 221.9
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 221.2
GTEX-Q734-0726-SM-48TZP 40-49 years, female 221.0
GTEX-183WM-1926-SM-72D5F 70-79 years, female 220.6
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 220.0
GTEX-S32W-1226-SM-4AD67 50-59 years, female 217.8
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 216.6
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 209.8
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 204.0
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 197.6
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 196.7
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 196.3
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 195.0
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 191.5
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 190.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 187.0
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 186.2
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 185.1
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 184.4
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 182.2
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 178.9
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 173.4
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 172.6
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 171.8
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 168.7
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 165.8
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 157.9
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 153.5
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 152.3
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 151.6
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 150.5
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 150.0
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 149.5
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 136.8
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 135.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 133.2
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 131.9
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 130.8
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 113.0
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 108.9
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 103.5
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 98.0
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 95.3
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 92.8
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 90.2
GTEX-R55G-1526-SM-48FER 40-49 years, female 64.4
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

481.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 481.8
FF:10020-101D2 47,75,84 years, female 481.8

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