HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.6 nTPM
HPA Brain:107.5 nTPM
GTEx:17.6 nTPM
FANTOM5:636.8 Scaled Tags Per Million
Pig:188.1 nTPM
Mouse:76.9 nTPM
Allen mouse:1.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010024
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 107.5
Sample id Sample description nTPM
Hippocampus
nTPM: 94.6
2621 Female, age 67, right hemisphere 103.1
1898 Male, age 80, left hemisphere 100.6
1911 Female, age 85, right hemisphere 94.8
2148 Female, age 91, left hemisphere 93.9
1855 Male, age 76, left hemisphere 89.3
2529 Female, age 94, left hemisphere 86.1
Dentate gyrus
nTPM: 93.2
1927 Female, age 91, both hemispheres 127.0
2528 Male, age 74, both hemispheres 97.3
2530 Female, age 94, left hemisphere 85.6
2010 Male, age 76, both hemispheres 85.0
2246 Female, age 85, both hemispheres 82.7
2531 Female, age 67, both hemispheres 81.4
Entorhinal gyrus
nTPM: 88.5
1938 Female, age 85, left hemisphere 110.0
1787 Male, age 76, left hemisphere 95.6
2613 Female, age 94, left hemisphere 93.1
2117 Female, age 91, right hemisphere 91.7
2764 Male, age 80, right hemisphere 85.4
2686 Male, age 75, right hemisphere 54.8
Hippocampus, CA1
nTPM: 107.5
2749 Male, age 80, left hemisphere 154.1
2527 Male, age 74, both hemispheres 111.6
1873 Female, age 85, both hemispheres 107.7
2045 Male, age 76, both hemispheres 93.7
2082 Female, age 91, right hemisphere 70.6
Hippocampus, CA2
nTPM: 99.7
1963 Male, age 80, left hemisphere 121.1
1892 Male, age 76, both hemispheres 119.6
2249 Male, age 74, both hemispheres 102.5
2113 Female, age 91, right hemisphere 89.0
1940 Female, age 85, left hemisphere 88.1
2437 Female, age 94, left hemisphere 78.1
Hippocampus, CA3
nTPM: 93.1
2137 Male, age 80, left hemisphere 124.4
1867 Male, age 76, both hemispheres 96.6
1891 Female, age 85, both hemispheres 94.1
2620 Female, age 94, left hemisphere 88.8
2436 Male, age 74, both hemispheres 87.3
2861 Female, age 67, both hemispheres 67.3
Parahippocampal cortex
nTPM: 93.7
2250 Female, age 67, right hemisphere 116.5
1990 Female, age 91, right hemisphere 111.4
1850 Male, age 80, both hemispheres 106.7
1933 Female, age 85, both hemispheres 97.4
2245 Female, age 91, both hemispheres 93.3
2692 Male, age 74, both hemispheres 86.6
2532 Female, age 72, left hemisphere 85.8
2622 Female, age 67, right hemisphere 80.6
2693 Female, age 94, both hemispheres 80.0
2018 Male, age 76, both hemispheres 78.8
Perirhinal gyrus
nTPM: 103.0
1847 Female, age 91, left hemisphere 120.2
1841 Female, age 85, right hemisphere 116.6
1794 Male, age 80, right hemisphere 102.9
2521 Female, age 94, right hemisphere 97.4
2848 Male, age 76, right hemisphere 77.9
Subiculum
nTPM: 89.3
1901 Male, age 80, both hemispheres 100.3
2619 Male, age 74, both hemispheres 97.0
1977 Female, age 85, both hemispheres 94.4
2729 Female, age 91, right hemisphere 87.8
2438 Female, age 94, left hemisphere 85.7
2042 Male, age 76, both hemispheres 70.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.6
Samples: 255

Max nTPM: 38.7
Min nTPM: 3.0
Std nTPM: 5.7
Median nTPM: 17.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 37.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 32.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 31.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 31.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 30.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 28.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 28.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 28.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 27.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 636.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 636.8
FF:10169-103B7 60 years, female 641.8
FF:10153-102I9 76 years, female 631.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 188.1
Pig sample Sample description nTPM
Subiculum
nTPM: 118.5
Samples: 4

Max nTPM: 150.4
Min nTPM: 83.2
Sample A Female 150.4
Sample B Female 115.8
Sample C Male 83.2
Sample D Male 124.6
Dorsal hippocampus
nTPM: 188.1
Samples: 4

Max nTPM: 235.8
Min nTPM: 143.9
Sample A Female 203.3
Sample B Female 169.3
Sample C Male 143.9
Sample D Male 235.8
Entorhinal cortex
nTPM: 156.7
Samples: 4

Max nTPM: 170.5
Min nTPM: 145.3
Sample A Female 170.5
Sample B Female 163.8
Sample C Male 145.3
Sample D Male 147.1
Ventral hippocampus
nTPM: 93.0
Samples: 4

Max nTPM: 148.8
Min nTPM: 64.2
Sample A Female 72.2
Sample B Female 86.8
Sample C Male 64.2
Sample D Male 148.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 76.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.9
Samples: 4

Max nTPM: 85.3
Min nTPM: 71.0
Sample A Male 78.1
Sample B Male 73.1
Sample C Female 71.0
Sample D Female 85.3
Hippocampal formation
nTPM: 75.1
Samples: 4

Max nTPM: 91.9
Min nTPM: 66.2
Sample A Male 66.2
Sample B Male 76.1
Sample C Female 91.9
Sample D Female 66.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
70278015 Antisense, RP_050531_02_B12, Mouse strain C57BL/6J (56 days, male) 2.1
73635999 Antisense, RP_051101_03_D02, Mouse strain C57BL/6J (56 days, male) 1.5

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