HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:78.5 nTPM
HPA Brain:135.4 nTPM
GTEx:78.5 nTPM
FANTOM5:69.5 Scaled Tags Per Million
Pig:90.7 nTPM
Mouse:448.2 nTPM
Allen mouse:18.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042800
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 135.4
Sample id Sample description nTPM
Hippocampus
nTPM: 98.4
1898 Male, age 80, left hemisphere 126.5
1911 Female, age 85, right hemisphere 114.6
2621 Female, age 67, right hemisphere 108.4
2148 Female, age 91, left hemisphere 93.1
1855 Male, age 76, left hemisphere 77.8
2529 Female, age 94, left hemisphere 70.2
Dentate gyrus
nTPM: 101.5
1927 Female, age 91, both hemispheres 133.4
2531 Female, age 67, both hemispheres 120.3
2010 Male, age 76, both hemispheres 96.8
2246 Female, age 85, both hemispheres 94.2
2530 Female, age 94, left hemisphere 85.8
2528 Male, age 74, both hemispheres 78.5
Entorhinal gyrus
nTPM: 93.3
2613 Female, age 94, left hemisphere 120.3
2764 Male, age 80, right hemisphere 119.3
1938 Female, age 85, left hemisphere 103.7
1787 Male, age 76, left hemisphere 93.9
2686 Male, age 75, right hemisphere 64.7
2117 Female, age 91, right hemisphere 57.8
Hippocampus, CA1
nTPM: 135.4
2749 Male, age 80, left hemisphere 304.8
1873 Female, age 85, both hemispheres 109.4
2045 Male, age 76, both hemispheres 96.4
2527 Male, age 74, both hemispheres 84.1
2082 Female, age 91, right hemisphere 82.1
Hippocampus, CA2
nTPM: 90.5
1963 Male, age 80, left hemisphere 135.9
1892 Male, age 76, both hemispheres 97.2
1940 Female, age 85, left hemisphere 79.9
2249 Male, age 74, both hemispheres 79.4
2113 Female, age 91, right hemisphere 78.4
2437 Female, age 94, left hemisphere 72.0
Hippocampus, CA3
nTPM: 131.4
2137 Male, age 80, left hemisphere 263.0
2620 Female, age 94, left hemisphere 135.5
2861 Female, age 67, both hemispheres 111.0
1867 Male, age 76, both hemispheres 102.7
1891 Female, age 85, both hemispheres 92.8
2436 Male, age 74, both hemispheres 83.2
Parahippocampal cortex
nTPM: 87.7
2245 Female, age 91, both hemispheres 110.1
1933 Female, age 85, both hemispheres 103.7
1850 Male, age 80, both hemispheres 103.6
2250 Female, age 67, right hemisphere 94.3
1990 Female, age 91, right hemisphere 89.0
2532 Female, age 72, left hemisphere 85.4
2018 Male, age 76, both hemispheres 83.2
2693 Female, age 94, both hemispheres 79.6
2622 Female, age 67, right hemisphere 74.6
2692 Male, age 74, both hemispheres 53.4
Perirhinal gyrus
nTPM: 105.3
1847 Female, age 91, left hemisphere 137.5
1794 Male, age 80, right hemisphere 118.7
1841 Female, age 85, right hemisphere 101.6
2521 Female, age 94, right hemisphere 101.5
2848 Male, age 76, right hemisphere 67.4
Subiculum
nTPM: 86.2
1901 Male, age 80, both hemispheres 133.9
1977 Female, age 85, both hemispheres 103.2
2042 Male, age 76, both hemispheres 88.9
2729 Female, age 91, right hemisphere 72.5
2619 Male, age 74, both hemispheres 60.5
2438 Female, age 94, left hemisphere 58.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 78.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.5
Samples: 255

Max nTPM: 247.9
Min nTPM: 16.1
Std nTPM: 42.9
Median nTPM: 72.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 247.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 215.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 207.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 194.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 191.3
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 190.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 187.8
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 182.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 175.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 165.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 160.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 69.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.5
FF:10169-103B7 60 years, female 99.7
FF:10153-102I9 76 years, female 39.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 90.7
Pig sample Sample description nTPM
Subiculum
nTPM: 51.9
Samples: 4

Max nTPM: 62.6
Min nTPM: 39.0
Sample A Female 62.6
Sample B Female 49.1
Sample C Male 56.7
Sample D Male 39.0
Dorsal hippocampus
nTPM: 90.8
Samples: 4

Max nTPM: 116.6
Min nTPM: 69.0
Sample A Female 116.6
Sample B Female 103.4
Sample C Male 69.0
Sample D Male 74.0
Entorhinal cortex
nTPM: 59.0
Samples: 4

Max nTPM: 62.5
Min nTPM: 52.2
Sample A Female 60.7
Sample B Female 62.5
Sample C Male 60.6
Sample D Male 52.2
Ventral hippocampus
nTPM: 73.7
Samples: 4

Max nTPM: 113.6
Min nTPM: 50.7
Sample A Female 62.5
Sample B Female 50.7
Sample C Male 67.9
Sample D Male 113.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 448.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 301.0
Samples: 4

Max nTPM: 315.6
Min nTPM: 285.1
Sample A Male 285.1
Sample B Male 305.5
Sample C Female 315.6
Sample D Female 297.8
Hippocampal formation
nTPM: 448.2
Samples: 4

Max nTPM: 478.7
Min nTPM: 412.3
Sample A Male 434.1
Sample B Male 467.6
Sample C Female 478.7
Sample D Female 412.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 18.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.6
71493117 Antisense, RP_050913_02_B11, Mouse strain C57BL/6J (56 days, male) 18.6

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