HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:43.8 nTPM
HPA Brain:95.0 nTPM
GTEx:43.8 nTPM
FANTOM5:100.3 Scaled Tags Per Million
Pig:63.8 nTPM
Mouse:52.5 nTPM
Allen mouse:6.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052607
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 95.0
Sample id Sample description nTPM
Hippocampus
nTPM: 95.0
1911 Female, age 85, right hemisphere 100.7
2148 Female, age 91, left hemisphere 100.1
1855 Male, age 76, left hemisphere 98.3
2529 Female, age 94, left hemisphere 94.0
2621 Female, age 67, right hemisphere 91.7
1898 Male, age 80, left hemisphere 85.3
Dentate gyrus
nTPM: 85.6
2528 Male, age 74, both hemispheres 87.1
2246 Female, age 85, both hemispheres 86.9
2531 Female, age 67, both hemispheres 86.6
1927 Female, age 91, both hemispheres 84.5
2010 Male, age 76, both hemispheres 84.4
2530 Female, age 94, left hemisphere 84.2
Entorhinal gyrus
nTPM: 85.9
2117 Female, age 91, right hemisphere 97.0
2686 Male, age 75, right hemisphere 86.1
2764 Male, age 80, right hemisphere 86.1
1938 Female, age 85, left hemisphere 84.9
1787 Male, age 76, left hemisphere 81.2
2613 Female, age 94, left hemisphere 80.4
Hippocampus, CA1
nTPM: 88.7
2749 Male, age 80, left hemisphere 95.7
2082 Female, age 91, right hemisphere 94.3
1873 Female, age 85, both hemispheres 90.9
2527 Male, age 74, both hemispheres 90.8
2045 Male, age 76, both hemispheres 71.6
Hippocampus, CA2
nTPM: 88.8
1963 Male, age 80, left hemisphere 105.8
2113 Female, age 91, right hemisphere 95.5
1940 Female, age 85, left hemisphere 89.5
2437 Female, age 94, left hemisphere 87.9
2249 Male, age 74, both hemispheres 82.7
1892 Male, age 76, both hemispheres 71.3
Hippocampus, CA3
nTPM: 89.2
2861 Female, age 67, both hemispheres 102.7
1891 Female, age 85, both hemispheres 96.7
2137 Male, age 80, left hemisphere 94.7
2620 Female, age 94, left hemisphere 81.7
1867 Male, age 76, both hemispheres 80.7
2436 Male, age 74, both hemispheres 79.0
Parahippocampal cortex
nTPM: 80.8
2692 Male, age 74, both hemispheres 93.9
2245 Female, age 91, both hemispheres 86.8
2018 Male, age 76, both hemispheres 85.5
1990 Female, age 91, right hemisphere 81.2
2532 Female, age 72, left hemisphere 79.9
1933 Female, age 85, both hemispheres 78.8
2622 Female, age 67, right hemisphere 76.7
2693 Female, age 94, both hemispheres 75.6
2250 Female, age 67, right hemisphere 74.8
1850 Male, age 80, both hemispheres 74.6
Perirhinal gyrus
nTPM: 69.5
1841 Female, age 85, right hemisphere 72.4
1794 Male, age 80, right hemisphere 70.5
2521 Female, age 94, right hemisphere 70.4
1847 Female, age 91, left hemisphere 69.8
2848 Male, age 76, right hemisphere 64.5
Subiculum
nTPM: 92.2
2042 Male, age 76, both hemispheres 113.6
1901 Male, age 80, both hemispheres 98.2
2619 Male, age 74, both hemispheres 92.2
2729 Female, age 91, right hemisphere 91.9
1977 Female, age 85, both hemispheres 83.7
2438 Female, age 94, left hemisphere 73.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.8
Samples: 255

Max nTPM: 98.7
Min nTPM: 14.7
Std nTPM: 11.9
Median nTPM: 41.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 98.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 84.7
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 78.1
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 76.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 76.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 75.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 73.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 73.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 73.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 72.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 70.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 100.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.3
FF:10153-102I9 76 years, female 139.3
FF:10169-103B7 60 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 63.8
Pig sample Sample description nTPM
Subiculum
nTPM: 55.9
Samples: 4

Max nTPM: 64.1
Min nTPM: 51.5
Sample A Female 64.1
Sample B Female 55.3
Sample C Male 52.7
Sample D Male 51.5
Dorsal hippocampus
nTPM: 62.5
Samples: 4

Max nTPM: 67.6
Min nTPM: 55.1
Sample A Female 67.6
Sample B Female 66.2
Sample C Male 61.0
Sample D Male 55.1
Entorhinal cortex
nTPM: 55.8
Samples: 4

Max nTPM: 57.9
Min nTPM: 52.1
Sample A Female 57.0
Sample B Female 56.1
Sample C Male 57.9
Sample D Male 52.1
Ventral hippocampus
nTPM: 63.8
Samples: 4

Max nTPM: 78.3
Min nTPM: 53.4
Sample A Female 53.4
Sample B Female 54.4
Sample C Male 69.1
Sample D Male 78.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 52.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 46.6
Min nTPM: 41.4
Sample A Male 46.6
Sample B Male 41.4
Sample C Female 45.6
Sample D Female 41.9
Hippocampal formation
nTPM: 52.5
Samples: 4

Max nTPM: 54.8
Min nTPM: 50.1
Sample A Male 50.4
Sample B Male 54.7
Sample C Female 54.8
Sample D Female 50.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
68498986 Antisense, RP_050113_02_G04, Mouse strain C57BL/6J (56 days, male) 6.2

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