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ARHGAP1
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ARHGAP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

118.317
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:31.0 nTPM
HPA Brain:68.5 nTPM
GTEx:31.0 nTPM
Pig:40.2 nTPM
Mouse:48.5 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA004689
Hypothalamus mean intensity 118.317
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 118.317
Mammillary nucleus 46.728
Periventricular hypothalamic nucleus 102.610
Supraoptic nucleus 96.968
Tuberal nucleus -
Ventral tuberomammillary nucleus 37.761
Lateral preoptic area 56.430
Medial preoptic area 47.735
Suprachiasmatic nucleus 111.734
Paraventricular hypothalamic nucleus 69.012
Anterior hypothalamic area, central 75.762
Ventral medial hypothalamic nucleus -
Ventral medial hypothalamic nucleus* -
Arcuate nucleus -
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 62.190
Dorsal medial hypothalamic nucleus -
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 48.8
1961 Female, age 42, unknown 52.4
2226 Male, age 75, left hemisphere 45.1
Dorsomedial nucleus
nTPM: 50.5
2017 Female, age 42, unknown 57.0
2041 Female, age 72, unknown 47.4
1989 Male, age 62, unknown 47.0
Lateral hypothalamic area
nTPM: 52.7
2271 Male, age 75, both hemispheres 58.9
1791 Male, age 80, right hemisphere 54.7
2412 Male, age 62, unknown 52.8
2228 Male, age 66, unknown 44.6
Mammillary body
nTPM: 56.2
1834 Female, age 42, unknown 62.6
1948 Female, age 72, unknown 58.9
1945 Male, age 80, right hemisphere 58.4
2413 Male, age 66, unknown 53.6
1923 Female, age 72, unknown 47.6
Paraventricular nucleus
nTPM: 68.5
2700 Male, age 62, unknown 68.5
Preoptic area
nTPM: 55.7
2414 Female, age 72, unknown 70.2
1861 Female, age 42, unknown 56.7
1907 Male, age 80, right hemisphere 40.2
Supraoptic nucleus
nTPM: 53.3
2043 Male, age 62, unknown 56.8
2835 Female, age 72, unknown 56.2
1894 Female, age 72, unknown 46.9
Ventromedial nucleus
nTPM: 52.8
1982 Female, age 72, unknown 54.0
1822 Female, age 42, unknown 51.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 31.0
Samples: 257

Max nTPM: 82.7
Min nTPM: 14.1
Std nTPM: 8.5
Median nTPM: 29.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 82.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 65.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 58.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 57.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 56.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 56.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 54.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 50.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 50.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 49.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 48.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 47.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 46.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 44.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 43.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 43.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 43.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 43.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 42.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 42.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 41.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 41.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 41.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 41.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 41.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 40.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 40.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 40.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 40.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 40.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 39.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 39.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 39.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 39.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 39.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 39.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 39.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 39.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 39.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 39.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 38.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 38.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 38.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 38.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 38.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 38.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 38.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 37.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 37.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 36.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 36.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 36.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 36.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 36.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 35.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 35.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 35.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 35.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 35.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 35.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 35.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 35.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 35.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 35.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 35.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 34.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 34.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 34.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 34.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 34.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 34.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 34.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 34.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 34.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 34.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 34.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 33.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 33.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 33.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 32.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 32.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 32.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 32.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 32.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 32.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 32.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 32.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 32.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 31.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 31.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 31.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 31.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 31.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 31.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 31.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 31.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 31.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 31.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 31.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 31.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 31.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 31.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 31.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 31.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 31.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 31.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 31.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 31.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 30.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 30.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 30.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 30.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 30.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 30.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 30.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 30.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 30.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 30.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 30.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 30.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 30.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 30.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 30.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 29.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 29.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 29.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 29.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 29.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 29.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 29.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 29.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 29.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 29.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 29.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 29.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 29.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 29.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 29.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 28.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 28.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 28.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 28.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 28.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 28.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 28.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 28.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 28.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 28.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 28.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 28.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 28.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 27.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 27.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 27.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 27.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 27.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 27.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 27.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 27.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 27.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 27.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 27.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 27.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 27.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 27.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 27.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 27.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 27.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 27.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 27.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 26.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 26.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 26.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 26.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 26.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 26.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 26.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 26.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 26.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 26.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 26.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 25.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 25.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 25.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 25.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 25.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 25.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 25.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 25.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 25.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 25.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 25.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 25.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 25.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 25.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 24.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 24.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 24.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 24.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 24.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 24.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 24.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 24.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 24.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 24.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 24.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 24.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 24.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 24.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 23.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 23.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 23.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 23.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 23.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 23.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 23.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 23.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 23.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 23.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 23.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 23.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 23.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 23.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 23.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 22.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 22.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 22.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 22.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 22.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 22.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 22.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 22.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 22.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 22.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 22.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 21.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 21.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 21.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 21.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 21.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 21.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 21.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 21.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 20.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 20.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 20.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 20.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 20.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 20.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 19.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 19.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 19.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 18.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 17.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 14.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 40.2
Samples: 4

Max nTPM: 46.3
Min nTPM: 31.2
Sample A Female 43.9
Sample B Female 39.4
Sample C Male 46.3
Sample D Male 31.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 48.4
Samples: 4

Max nTPM: 50.3
Min nTPM: 46.5
Sample A Male 48.9
Sample B Male 48.0
Sample C Female 50.3
Sample D Female 46.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.6
69526797 Antisense, RP_050421_01_F08, Mouse strain C57BL/6J (56 days, male) 0.6

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