HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:158.4 nTPM
HPA Brain:78.4 nTPM
GTEx:158.4 nTPM
FANTOM5:112.8 Scaled Tags Per Million
Pig:262.1 nTPM
Mouse:317.9 nTPM
Allen mouse:12.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006790
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 78.4
Sample id Sample description nTPM
Hippocampus
nTPM: 78.4
2529 Female, age 94, left hemisphere 95.4
2621 Female, age 67, right hemisphere 87.3
1898 Male, age 80, left hemisphere 77.0
1855 Male, age 76, left hemisphere 76.9
1911 Female, age 85, right hemisphere 67.0
2148 Female, age 91, left hemisphere 66.7
Dentate gyrus
nTPM: 68.4
2530 Female, age 94, left hemisphere 102.3
2010 Male, age 76, both hemispheres 69.1
2246 Female, age 85, both hemispheres 69.1
2531 Female, age 67, both hemispheres 62.5
1927 Female, age 91, both hemispheres 59.4
2528 Male, age 74, both hemispheres 48.2
Entorhinal gyrus
nTPM: 73.2
2764 Male, age 80, right hemisphere 86.7
1938 Female, age 85, left hemisphere 74.1
2686 Male, age 75, right hemisphere 74.1
2117 Female, age 91, right hemisphere 69.6
2613 Female, age 94, left hemisphere 68.1
1787 Male, age 76, left hemisphere 66.7
Hippocampus, CA1
nTPM: 76.7
2749 Male, age 80, left hemisphere 105.0
2527 Male, age 74, both hemispheres 79.5
2045 Male, age 76, both hemispheres 75.1
1873 Female, age 85, both hemispheres 67.1
2082 Female, age 91, right hemisphere 57.0
Hippocampus, CA2
nTPM: 67.3
1892 Male, age 76, both hemispheres 81.3
2437 Female, age 94, left hemisphere 76.7
1940 Female, age 85, left hemisphere 69.7
1963 Male, age 80, left hemisphere 64.3
2249 Male, age 74, both hemispheres 59.1
2113 Female, age 91, right hemisphere 52.6
Hippocampus, CA3
nTPM: 68.1
1867 Male, age 76, both hemispheres 76.1
2137 Male, age 80, left hemisphere 74.8
2861 Female, age 67, both hemispheres 74.1
1891 Female, age 85, both hemispheres 64.4
2620 Female, age 94, left hemisphere 61.6
2436 Male, age 74, both hemispheres 57.6
Parahippocampal cortex
nTPM: 73.4
2245 Female, age 91, both hemispheres 99.0
2532 Female, age 72, left hemisphere 85.3
2622 Female, age 67, right hemisphere 74.0
2018 Male, age 76, both hemispheres 73.3
2250 Female, age 67, right hemisphere 71.2
1933 Female, age 85, both hemispheres 70.8
1850 Male, age 80, both hemispheres 70.3
2692 Male, age 74, both hemispheres 67.0
1990 Female, age 91, right hemisphere 64.7
2693 Female, age 94, both hemispheres 58.6
Perirhinal gyrus
nTPM: 72.0
1841 Female, age 85, right hemisphere 77.9
1847 Female, age 91, left hemisphere 75.9
1794 Male, age 80, right hemisphere 72.1
2848 Male, age 76, right hemisphere 70.6
2521 Female, age 94, right hemisphere 63.8
Subiculum
nTPM: 74.0
2438 Female, age 94, left hemisphere 85.0
2042 Male, age 76, both hemispheres 83.7
1901 Male, age 80, both hemispheres 79.8
2619 Male, age 74, both hemispheres 71.2
1977 Female, age 85, both hemispheres 70.9
2729 Female, age 91, right hemisphere 53.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 158.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 158.4
Samples: 255

Max nTPM: 358.1
Min nTPM: 52.1
Std nTPM: 36.0
Median nTPM: 154.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 358.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 286.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 278.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 278.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 255.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 248.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 247.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 247.3
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 246.1
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 242.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 231.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 112.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.8
FF:10153-102I9 76 years, female 114.6
FF:10169-103B7 60 years, female 111.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 262.1
Pig sample Sample description nTPM
Subiculum
nTPM: 234.2
Samples: 4

Max nTPM: 309.3
Min nTPM: 195.4
Sample A Female 309.3
Sample B Female 195.4
Sample C Male 219.7
Sample D Male 212.3
Dorsal hippocampus
nTPM: 261.7
Samples: 4

Max nTPM: 339.0
Min nTPM: 187.0
Sample A Female 339.0
Sample B Female 241.7
Sample C Male 278.9
Sample D Male 187.0
Entorhinal cortex
nTPM: 229.7
Samples: 4

Max nTPM: 271.9
Min nTPM: 194.4
Sample A Female 226.8
Sample B Female 225.6
Sample C Male 271.9
Sample D Male 194.4
Ventral hippocampus
nTPM: 262.1
Samples: 4

Max nTPM: 332.0
Min nTPM: 182.0
Sample A Female 269.6
Sample B Female 182.0
Sample C Male 332.0
Sample D Male 264.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 317.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 257.6
Samples: 4

Max nTPM: 277.3
Min nTPM: 231.7
Sample A Male 277.3
Sample B Male 231.7
Sample C Female 273.8
Sample D Female 247.5
Hippocampal formation
nTPM: 317.9
Samples: 4

Max nTPM: 341.2
Min nTPM: 293.8
Sample A Male 341.2
Sample B Male 310.5
Sample C Female 326.0
Sample D Female 293.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
70431295 Antisense, RP_050614_02_E09, Mouse strain C57BL/6J (56 days, male) 12.1

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