HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:66.2 nTPM
HPA Brain:157.8 nTPM
GTEx:66.2 nTPM
FANTOM5:74.6 Scaled Tags Per Million
Pig:88.9 nTPM
Mouse:117.7 nTPM
Allen mouse:9.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022541Antibody HPA023304
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 157.8
Sample id Sample description nTPM
Hippocampus
nTPM: 151.7
2621 Female, age 67, right hemisphere 168.1
2148 Female, age 91, left hemisphere 158.7
2529 Female, age 94, left hemisphere 156.7
1911 Female, age 85, right hemisphere 155.6
1898 Male, age 80, left hemisphere 138.6
1855 Male, age 76, left hemisphere 132.7
Dentate gyrus
nTPM: 142.0
2531 Female, age 67, both hemispheres 157.5
1927 Female, age 91, both hemispheres 152.5
2530 Female, age 94, left hemisphere 148.1
2528 Male, age 74, both hemispheres 136.1
2010 Male, age 76, both hemispheres 134.9
2246 Female, age 85, both hemispheres 122.7
Entorhinal gyrus
nTPM: 147.2
2613 Female, age 94, left hemisphere 171.5
2764 Male, age 80, right hemisphere 162.1
2686 Male, age 75, right hemisphere 149.8
1938 Female, age 85, left hemisphere 134.8
2117 Female, age 91, right hemisphere 134.5
1787 Male, age 76, left hemisphere 130.7
Hippocampus, CA1
nTPM: 151.5
2749 Male, age 80, left hemisphere 210.4
2527 Male, age 74, both hemispheres 160.2
1873 Female, age 85, both hemispheres 141.0
2082 Female, age 91, right hemisphere 134.8
2045 Male, age 76, both hemispheres 111.2
Hippocampus, CA2
nTPM: 145.5
1963 Male, age 80, left hemisphere 190.5
2113 Female, age 91, right hemisphere 145.7
2437 Female, age 94, left hemisphere 141.6
1892 Male, age 76, both hemispheres 138.7
2249 Male, age 74, both hemispheres 130.9
1940 Female, age 85, left hemisphere 125.7
Hippocampus, CA3
nTPM: 157.8
2137 Male, age 80, left hemisphere 191.1
2861 Female, age 67, both hemispheres 188.7
2620 Female, age 94, left hemisphere 169.5
1891 Female, age 85, both hemispheres 136.4
1867 Male, age 76, both hemispheres 132.3
2436 Male, age 74, both hemispheres 128.7
Parahippocampal cortex
nTPM: 141.5
2622 Female, age 67, right hemisphere 164.6
2245 Female, age 91, both hemispheres 157.9
2692 Male, age 74, both hemispheres 155.5
1933 Female, age 85, both hemispheres 141.5
1990 Female, age 91, right hemisphere 140.6
2693 Female, age 94, both hemispheres 140.5
1850 Male, age 80, both hemispheres 137.3
2532 Female, age 72, left hemisphere 136.2
2018 Male, age 76, both hemispheres 121.0
2250 Female, age 67, right hemisphere 119.4
Perirhinal gyrus
nTPM: 134.4
1847 Female, age 91, left hemisphere 146.8
1794 Male, age 80, right hemisphere 140.4
2521 Female, age 94, right hemisphere 131.8
1841 Female, age 85, right hemisphere 129.6
2848 Male, age 76, right hemisphere 123.4
Subiculum
nTPM: 141.2
1901 Male, age 80, both hemispheres 160.9
2619 Male, age 74, both hemispheres 147.9
2042 Male, age 76, both hemispheres 141.3
2438 Female, age 94, left hemisphere 136.1
1977 Female, age 85, both hemispheres 134.7
2729 Female, age 91, right hemisphere 126.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 66.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.2
Samples: 255

Max nTPM: 135.3
Min nTPM: 27.7
Std nTPM: 15.9
Median nTPM: 64.7
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 135.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 108.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 108.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 107.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 106.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 100.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 98.9
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 98.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 97.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 97.5
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 95.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 74.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.6
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 71.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 88.9
Pig sample Sample description nTPM
Subiculum
nTPM: 75.5
Samples: 4

Max nTPM: 94.4
Min nTPM: 62.8
Sample A Female 94.4
Sample B Female 64.5
Sample C Male 80.2
Sample D Male 62.8
Dorsal hippocampus
nTPM: 72.0
Samples: 4

Max nTPM: 88.7
Min nTPM: 54.9
Sample A Female 88.7
Sample B Female 69.9
Sample C Male 74.3
Sample D Male 54.9
Entorhinal cortex
nTPM: 88.9
Samples: 4

Max nTPM: 101.2
Min nTPM: 79.0
Sample A Female 89.6
Sample B Female 79.0
Sample C Male 101.2
Sample D Male 85.8
Ventral hippocampus
nTPM: 80.1
Samples: 4

Max nTPM: 111.0
Min nTPM: 56.3
Sample A Female 73.0
Sample B Female 56.3
Sample C Male 111.0
Sample D Male 80.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 117.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.7
Samples: 4

Max nTPM: 122.7
Min nTPM: 112.7
Sample A Male 117.7
Sample B Male 117.6
Sample C Female 112.7
Sample D Female 122.7
Hippocampal formation
nTPM: 99.1
Samples: 4

Max nTPM: 106.4
Min nTPM: 94.5
Sample A Male 106.4
Sample B Male 97.3
Sample C Female 94.5
Sample D Female 98.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.4
74749970 Antisense, RP_060220_04_F08, Mouse strain C57BL/6J (56 days, male) 9.9
70191937 Antisense, RP_050512_04_H08, Mouse strain C57BL/6J (56 days, male) 8.8

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