COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:71.4 nTPM
HPA:43.4 nTPM
GTEx:71.4 nTPM
FANTOM5:89.2 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA023084
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Medium


COLON - HPA RNA-seqi
Average nTPMi 43.4
overview
Male, age 54
Colon sample 67
nTPM: 40.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 45
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 58
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 45.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 31.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 32.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 32.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 65.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 47
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 36.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 45.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 41.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 43.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 71.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 71.4
Samples: 419

Max nTPM: 196.7
Min nTPM: 28.9
Std nTPM: 19.2
Median nTPM: 68.8
GTEX-14A5H-1626-SM-5MR7O 60-69 years, male 196.7
GTEX-11UD2-2226-SM-GI4WZ 50-59 years, male 175.9
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 161.6
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 157.1
GTEX-144GM-1126-SM-5O98M 20-29 years, male 140.7
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 137.8
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 135.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 131.5
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 123.4
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 116.3
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 115.6
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Colon - Transverse
Average nTPM: 61.7
Samples: 479

Max nTPM: 152.1
Min nTPM: 22.3
Std nTPM: 17.3
Median nTPM: 60.5
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 152.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 120.3
GTEX-Q2AG-2026-SM-HAUY4 40-49 years, female 117.7
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 117.5
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 113.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 108.0
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 103.8
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 103.6
GTEX-14PKV-2126-SM-664O3 20-29 years, female 103.2
GTEX-YEC3-2426-SM-DO11A 50-59 years, male 103.2
GTEX-1S83E-1626-SM-EV7B9 40-49 years, male 100.9
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 89.2
FF:10014-101C5 62,83,84 years, mixed 89.2

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