PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:302.4 nTPM
FANTOM5:300.5 Scaled Tags Per Million
Pig:739.7 nTPM
Mouse:732.5 nTPM
Allen mouse:4.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 302.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 226.7
1984 Male, age 76, both hemispheres 259.0
2090 Male, age 80, both hemispheres 246.8
2188 Female, age 91, both hemispheres 217.1
2301 Female, age 85, both hemispheres 183.8
Area postrema
nTPM: 252.1
2799 Male, age 61, both hemispheres 313.9
2306 Male, age 80, both hemispheres 224.4
2054 Male, age 76, both hemispheres 218.1
Dorsal cochlear nucleus
nTPM: 267.2
2802 Male, age 74, right hemisphere 342.0
2058 Male, age 76, both hemispheres 267.5
2370 Male, age 61, both hemispheres 264.7
2187 Female, age 91, both hemispheres 258.9
2378 Male, age 80, both hemispheres 202.9
Dorsal medullary reticular nucleus
nTPM: 259.2
2040 Female, age 85, both hemispheres 369.6
2088 Male, age 76, both hemispheres 211.8
2373 Male, age 61, both hemispheres 196.2
Dorsal motor vagal complex
nTPM: 261.3
2797 Male, age 61, both hemispheres 345.8
2133 Female, age 91, both hemispheres 307.7
2844 Male, age 55, unknown 294.9
2000 Male, age 74, unknown 290.2
2643 Male, age 74, both hemispheres 282.6
2185 Male, age 76, both hemispheres 207.9
2813 Female, age 72, unknown 197.5
2807 Female, age 85, both hemispheres 164.1
Dorsal tegmental nucleus
nTPM: 254.4
2083 Male, age 80, both hemispheres 312.9
2326 Male, age 74, both hemispheres 267.5
1936 Male, age 76, left hemisphere 236.8
2358 Male, age 61, both hemispheres 200.4
Dorsolateral tegmental area
nTPM: 277.1
2751 Female, age 85, both hemispheres 331.0
2654 Male, age 80, both hemispheres 324.8
2360 Male, age 74, both hemispheres 248.2
2337 Male, age 61, both hemispheres 242.3
2141 Male, age 76, both hemispheres 239.4
Gigantocellular reticular nuclei, medullary
nTPM: 243.1
1876 Female, age 85, both hemispheres 294.7
2022 Male, age 76, right hemisphere 282.1
2462 Male, age 74, both hemispheres 232.4
2314 Male, age 61, both hemispheres 226.6
2387 Female, age 91, both hemispheres 217.1
2310 Male, age 80, both hemispheres 206.0
Gigantocellular reticular nuclei, pars
nTPM: 219.8
2084 Female, age 85, both hemispheres 308.4
2168 Male, age 76, both hemispheres 248.4
2336 Male, age 61, both hemispheres 213.1
2706 Male, age 80, both hemispheres 172.2
2330 Male, age 80, both hemispheres 157.1
Inferior olive
nTPM: 245.5
2563 Male, age 74, both hemispheres 305.0
2085 Female, age 85, both hemispheres 284.9
2628 Female, age 91, both hemispheres 223.2
2178 Male, age 61, both hemispheres 213.7
2379 Male, age 80, both hemispheres 200.5
Kolliker-Fuse nucleus
nTPM: 273.6
2163 Male, age 80, both hemispheres 313.8
2315 Male, age 76, right hemisphere 293.5
2793 Female, age 91, left hemisphere 213.4
Lateral lemniscal nuclei
nTPM: 231.4
2036 Male, age 80, both hemispheres 265.9
2169 Male, age 76, both hemispheres 256.5
2746 Female, age 85, left hemisphere 249.2
2453 Male, age 74, right hemisphere 214.3
2320 Female, age 91, left hemisphere 171.1
Lateral medullary reticular nucleus
nTPM: 244.3
2044 Male, age 76, both hemispheres 297.5
2804 Female, age 91, both hemispheres 275.9
2852 Male, age 80, both hemispheres 267.7
2190 Female, age 85, both hemispheres 243.9
2305 Male, age 74, both hemispheres 200.2
2374 Male, age 61, both hemispheres 180.8
Lateral parabrachial nucleus
nTPM: 269.0
2139 Female, age 85, right hemisphere 297.0
2013 Male, age 80, both hemispheres 268.3
2790 Male, age 61, both hemispheres 266.7
2792 Male, age 76, both hemispheres 244.0
Lateral vestibular nucleus
nTPM: 260.1
2184 Male, age 76, both hemispheres 274.4
2311 Male, age 80, both hemispheres 245.7
Locus coeruleus
nTPM: 282.4
2123 Female, age 91, both hemispheres 370.8
2317 Female, age 72, unknown 313.1
2014 Male, age 55, unknown 290.7
1980 Male, age 76, both hemispheres 287.3
2162 Male, age 80, both hemispheres 253.7
2720 Male, age 74, both hemispheres 247.9
2788 Male, age 74, unknown 213.5
Medial olivary nucleus
nTPM: 239.3
2138 Female, age 91, both hemispheres 276.1
1962 Male, age 76, both hemispheres 239.0
1943 Male, age 61, both hemispheres 235.0
2851 Male, age 80, both hemispheres 207.3
Medial parabrachial nucleus
nTPM: 275.3
2170 Female, age 91, both hemispheres 349.8
2463 Female, age 85, right hemisphere 299.3
2156 Male, age 61, both hemispheres 257.4
2854 Male, age 80, both hemispheres 235.7
2786 Male, age 76, both hemispheres 234.5
Medial periolivary nuclei
nTPM: 230.9
2063 Male, age 76, both hemispheres 283.8
2171 Female, age 85, both hemispheres 264.7
2791 Male, age 74, right hemisphere 264.0
2081 Male, age 80, both hemispheres 183.2
2458 Female, age 91, both hemispheres 158.7
Medial vestibular nucleus
nTPM: 289.5
2803 Female, age 91, both hemispheres 341.3
2093 Male, age 80, both hemispheres 310.7
2743 Female, age 85, both hemispheres 302.1
2134 Male, age 76, both hemispheres 272.3
2624 Male, age 61, both hemispheres 259.0
2801 Male, age 74, both hemispheres 251.4
Motor facial nucleus
nTPM: 229.8
2062 Male, age 76, both hemispheres 315.4
2795 Female, age 91, both hemispheres 244.5
2126 Male, age 61, both hemispheres 238.1
2365 Male, age 74, right hemisphere 229.8
2327 Male, age 80, both hemispheres 177.2
2697 Female, age 85, both hemispheres 173.6
Motor hypoglossal nucleus
nTPM: 226.1
2125 Female, age 91, both hemispheres 302.6
2132 Female, age 85, both hemispheres 276.9
2277 Male, age 76, both hemispheres 205.6
2182 Male, age 80, both hemispheres 201.1
2461 Male, age 61, both hemispheres 144.1
Motor trigeminal nucleus
nTPM: 235.8
2309 Male, age 76, both hemispheres 267.8
2335 Male, age 61, both hemispheres 259.0
2560 Male, age 74, both hemispheres 255.4
2079 Male, age 80, both hemispheres 226.1
2321 Female, age 91, both hemispheres 170.8
Nuclei of the trapezoid body
nTPM: 250.6
1983 Male, age 76, both hemispheres 311.6
2159 Male, age 61, both hemispheres 283.8
2735 Female, age 85, both hemispheres 278.2
2166 Male, age 80, both hemispheres 195.6
2368 Female, age 91, both hemispheres 184.0
Nucleus ambiguus
nTPM: 270.1
2096 Female, age 85, both hemispheres 295.6
2071 Male, age 76, both hemispheres 244.6
Nucleus cuneatus
nTPM: 244.1
2564 Male, age 74, both hemispheres 325.0
2562 Male, age 61, both hemispheres 289.8
2376 Male, age 61, both hemispheres 263.8
2131 Male, age 76, both hemispheres 255.5
2805 Female, age 91, both hemispheres 244.2
2100 Male, age 76, both hemispheres 225.2
2380 Male, age 80, both hemispheres 211.0
2808 Female, age 85, both hemispheres 205.1
2381 Male, age 80, both hemispheres 176.9
Nucleus gracilis
nTPM: 209.2
2627 Male, age 74, both hemispheres 232.7
2299 Female, age 85, both hemispheres 202.1
2382 Male, age 80, both hemispheres 192.8
Nucleus raphe magnus
nTPM: 234.3
2160 Male, age 61, both hemispheres 323.8
2172 Female, age 85, both hemispheres 240.2
2051 Male, age 76, both hemispheres 237.6
2455 Male, age 74, both hemispheres 237.0
2328 Male, age 80, both hemispheres 192.9
2459 Female, age 91, both hemispheres 174.1
Nucleus raphe obscurus
nTPM: 252.4
2845 Female, age 85, midline 282.1
2800 Male, age 61, midline 275.1
2142 Male, age 76, midline 200.1
Nucleus raphe pallidus
nTPM: 254.6
1924 Male, age 61, midline 333.8
2183 Male, age 80, midline 260.7
2145 Male, age 76, midline 169.3
Nucleus tractus solitarii
nTPM: 223.4
2656 Male, age 76, both hemispheres 256.2
2191 Female, age 85, both hemispheres 229.8
2144 Female, age 91, right hemisphere 229.2
2307 Male, age 80, both hemispheres 178.2
Paramedian reticular nucleus
nTPM: 272.2
2050 Female, age 85, both hemispheres 316.9
2057 Male, age 80, both hemispheres 298.8
2313 Male, age 61, both hemispheres 267.8
2052 Male, age 76, both hemispheres 205.5
Parvicellular reticular nuclei
nTPM: 259.8
2119 Male, age 80, both hemispheres 300.6
2095 Male, age 76, both hemispheres 254.7
2558 Male, age 74, both hemispheres 224.2
Parvicellular reticular nuclei, medullary
nTPM: 284.7
2091 Female, age 85, both hemispheres 314.1
2189 Female, age 91, both hemispheres 296.7
2181 Male, age 80, left hemisphere 243.4
Pedunculopontine tegmental nucleus
nTPM: 272.5
1921 Female, age 85, both hemispheres 297.5
2334 Male, age 80, both hemispheres 289.5
2338 Male, age 61, both hemispheres 230.4
Peritrigeminal nucleus
nTPM: 291.2
2067 Female, age 85, both hemispheres 336.4
2136 Male, age 76, both hemispheres 303.7
2179 Male, age 61, both hemispheres 233.6
Pontine nuclei
nTPM: 280.3
1863 Male, age 55, unknown 380.4
2787 Female, age 85, both hemispheres 334.2
2727 Male, age 61, right hemisphere 318.7
2109 Female, age 72, unknown 298.6
1968 Male, age 76, left hemisphere 272.8
2454 Male, age 74, left hemisphere 223.1
2319 Female, age 91, both hemispheres 218.1
2115 Male, age 80, left hemisphere 196.3
Pontine raphe nucleus
nTPM: 287.0
2853 Male, age 76, midline 290.4
2122 Female, age 85, midline 283.7
Posteroventral cochlear nucleus
nTPM: 263.6
2752 Female, age 85, both hemispheres 303.1
2371 Male, age 61, both hemispheres 274.9
2070 Male, age 76, both hemispheres 259.7
2341 Male, age 80, both hemispheres 249.7
2135 Female, age 91, both hemispheres 230.8
Prepositus hypoglossal nucleus
nTPM: 292.6
2855 Female, age 85, right hemisphere 312.5
2086 Male, age 80, both hemispheres 272.7
Principal sensory trigeminal nucleus
nTPM: 239.6
2158 Male, age 61, both hemispheres 302.3
2324 Male, age 76, both hemispheres 247.3
2008 Male, age 80, left hemisphere 232.0
2367 Female, age 91, left hemisphere 176.8
Reticular pontine nucleus, caudal
nTPM: 222.7
2092 Male, age 76, both hemispheres 284.8
2559 Male, age 74, both hemispheres 250.5
2332 Male, age 80, right hemisphere 193.2
2457 Female, age 91, both hemispheres 162.1
Reticular pontine nucleus, oral
nTPM: 251.9
1939 Male, age 80, both hemispheres 315.6
2012 Female, age 85, both hemispheres 288.3
2167 Male, age 76, both hemispheres 271.9
2361 Male, age 74, both hemispheres 195.3
2366 Female, age 91, both hemispheres 188.4
Reticulotegmental nucleus
nTPM: 244.1
2452 Male, age 74, both hemispheres 280.6
2325 Male, age 76, both hemispheres 245.7
2333 Male, age 80, both hemispheres 235.3
2322 Female, age 91, both hemispheres 214.6
Spinal trigeminal nucleus, caudal
nTPM: 236.3
2390 Female, age 91, both hemispheres 280.1
2447 Male, age 76, both hemispheres 267.5
2642 Male, age 74, both hemispheres 222.2
2308 Male, age 80, both hemispheres 220.9
2312 Male, age 61, both hemispheres 190.9
Spinal trigeminal nucleus, interpolar
nTPM: 299.6
2066 Male, age 76, right hemisphere 385.4
2625 Male, age 61, both hemispheres 354.9
2033 Male, age 80, both hemispheres 296.9
2386 Female, age 85, both hemispheres 245.0
2389 Female, age 91, both hemispheres 215.7
Spinal trigeminal nucleus, oral
nTPM: 266.8
2737 Female, age 85, both hemispheres 318.7
2164 Male, age 80, both hemispheres 250.2
1978 Male, age 76, both hemispheres 231.7
Spinal vestibular nucleus
nTPM: 302.4
2806 Female, age 85, both hemispheres 325.5
2748 Male, age 76, both hemispheres 311.0
2780 Male, age 80, both hemispheres 307.7
2186 Female, age 91, both hemispheres 300.6
2796 Male, age 61, both hemispheres 288.3
2384 Male, age 74, both hemispheres 281.0
Subcoeruleus area
nTPM: 278.3
2323 Female, age 91, left hemisphere 304.0
2369 Female, age 85, left hemisphere 298.6
2451 Male, age 74, both hemispheres 293.4
1958 Male, age 80, both hemispheres 279.4
2089 Male, age 76, left hemisphere 216.1
Superior olive
nTPM: 216.1
1875 Female, age 85, both hemispheres 266.9
2020 Male, age 76, both hemispheres 245.6
2364 Male, age 74, right hemisphere 218.2
2329 Male, age 80, right hemisphere 179.1
2561 Female, age 91, both hemispheres 170.7
Superior vestibular nucleus
nTPM: 279.7
2015 Male, age 80, both hemispheres 288.4
2061 Male, age 76, both hemispheres 278.2
2383 Male, age 74, both hemispheres 272.6
Ventral medullary reticular nucleus
nTPM: 238.2
2060 Male, age 76, both hemispheres 254.2
2372 Male, age 61, both hemispheres 222.1
Ventral periolivary nuclei
nTPM: 223.5
2023 Male, age 76, both hemispheres 257.7
2165 Male, age 80, both hemispheres 242.0
2130 Female, age 85, both hemispheres 209.2
2794 Female, age 91, left hemisphere 184.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 271.3
1986 Male, age 76, both hemispheres 317.7
2741 Female, age 85, both hemispheres 310.0
2302 Female, age 91, both hemispheres 273.3
2180 Male, age 61, both hemispheres 234.3
2118 Male, age 80, both hemispheres 221.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 226.3
2359 Male, age 61, both hemispheres 253.7
2840 Female, age 85, both hemispheres 248.7
1959 Male, age 76, both hemispheres 233.7
2161 Male, age 80, both hemispheres 217.0
2449 Male, age 74, both hemispheres 208.2
2456 Female, age 91, both hemispheres 196.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 300.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 300.5
FF:10182-103D2 60 years, female 375.2
FF:10165-103B3 76 years, female 225.8
Medulla oblongata
Scaled Tags Per Million: 254.0
FF:10174-103C3 60 years, female 402.3
FF:10155-103A2 76 years, female 199.4
FF:10038-101F2 18-64 years, mixed 160.4
Pons
Scaled Tags Per Million: 170.1
FF:10033-101E6 18-54 years, mixed 170.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 739.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 620.3
Samples: 4

Max nTPM: 698.1
Min nTPM: 582.0
Sample A Female 582.0
Sample B Female 594.2
Sample C Male 698.1
Sample D Male 606.9
Pons
nTPM: 739.7
Samples: 4

Max nTPM: 925.6
Min nTPM: 488.0
Sample A Female 925.6
Sample B Female 488.0
Sample C Male 731.2
Sample D Male 813.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 732.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 732.5
Samples: 4

Max nTPM: 845.5
Min nTPM: 651.2
Sample A Male 772.3
Sample B Male 651.2
Sample C Female 845.5
Sample D Female 660.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.8
69568986 Antisense, RP_050426_03_C02, Mouse strain C57BL/6J (56 days, male) 4.8
Pons
Expression energy: 4.5
69568986 Antisense, RP_050426_03_C02, Mouse strain C57BL/6J (56 days, male) 4.5

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