HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:31.5 nTPM
HPA Brain:41.6 nTPM
GTEx:31.5 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:12.6 nTPM
Mouse:14.0 nTPM
Allen mouse:14.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041491Antibody CAB046012
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 41.6
Sample id Sample description nTPM
Hippocampus
nTPM: 37.9
1898 Male, age 80, left hemisphere 41.8
2621 Female, age 67, right hemisphere 41.7
2148 Female, age 91, left hemisphere 39.3
1855 Male, age 76, left hemisphere 38.5
2529 Female, age 94, left hemisphere 36.0
1911 Female, age 85, right hemisphere 30.2
Dentate gyrus
nTPM: 37.9
2010 Male, age 76, both hemispheres 42.7
1927 Female, age 91, both hemispheres 41.1
2528 Male, age 74, both hemispheres 37.3
2530 Female, age 94, left hemisphere 37.1
2531 Female, age 67, both hemispheres 34.5
2246 Female, age 85, both hemispheres 34.4
Entorhinal gyrus
nTPM: 40.4
1787 Male, age 76, left hemisphere 46.0
2764 Male, age 80, right hemisphere 44.3
2613 Female, age 94, left hemisphere 40.1
1938 Female, age 85, left hemisphere 39.5
2686 Male, age 75, right hemisphere 37.1
2117 Female, age 91, right hemisphere 35.3
Hippocampus, CA1
nTPM: 41.6
2749 Male, age 80, left hemisphere 50.9
2045 Male, age 76, both hemispheres 45.8
2527 Male, age 74, both hemispheres 37.5
1873 Female, age 85, both hemispheres 37.4
2082 Female, age 91, right hemisphere 36.6
Hippocampus, CA2
nTPM: 38.9
1892 Male, age 76, both hemispheres 46.7
1963 Male, age 80, left hemisphere 45.8
2249 Male, age 74, both hemispheres 38.7
2113 Female, age 91, right hemisphere 35.2
2437 Female, age 94, left hemisphere 33.8
1940 Female, age 85, left hemisphere 33.1
Hippocampus, CA3
nTPM: 40.8
1867 Male, age 76, both hemispheres 47.7
2137 Male, age 80, left hemisphere 42.8
2861 Female, age 67, both hemispheres 42.2
2436 Male, age 74, both hemispheres 41.0
2620 Female, age 94, left hemisphere 38.7
1891 Female, age 85, both hemispheres 32.5
Parahippocampal cortex
nTPM: 36.7
1933 Female, age 85, both hemispheres 41.1
1990 Female, age 91, right hemisphere 40.5
1850 Male, age 80, both hemispheres 40.3
2245 Female, age 91, both hemispheres 39.7
2532 Female, age 72, left hemisphere 37.0
2250 Female, age 67, right hemisphere 36.7
2622 Female, age 67, right hemisphere 35.3
2018 Male, age 76, both hemispheres 33.0
2692 Male, age 74, both hemispheres 32.2
2693 Female, age 94, both hemispheres 30.7
Perirhinal gyrus
nTPM: 40.1
1847 Female, age 91, left hemisphere 47.3
1794 Male, age 80, right hemisphere 40.9
1841 Female, age 85, right hemisphere 39.5
2848 Male, age 76, right hemisphere 38.3
2521 Female, age 94, right hemisphere 34.8
Subiculum
nTPM: 35.6
1977 Female, age 85, both hemispheres 38.1
2438 Female, age 94, left hemisphere 37.3
1901 Male, age 80, both hemispheres 35.9
2042 Male, age 76, both hemispheres 35.5
2729 Female, age 91, right hemisphere 33.4
2619 Male, age 74, both hemispheres 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 31.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.5
Samples: 255

Max nTPM: 63.4
Min nTPM: 19.3
Std nTPM: 5.6
Median nTPM: 31.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 63.4
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 48.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 45.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 44.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 44.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 44.1
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 43.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 43.2
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 42.1
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 40.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.8
FF:10169-103B7 60 years, female 45.6
FF:10153-102I9 76 years, female 30.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 12.6
Pig sample Sample description nTPM
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 15.8
Min nTPM: 9.2
Sample A Female 15.8
Sample B Female 10.8
Sample C Male 11.3
Sample D Male 9.2
Dorsal hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 16.8
Min nTPM: 9.6
Sample A Female 16.8
Sample B Female 12.5
Sample C Male 11.6
Sample D Male 9.6
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 13.1
Min nTPM: 8.5
Sample A Female 11.7
Sample B Female 10.5
Sample C Male 13.1
Sample D Male 8.5
Ventral hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 9.2
Sample A Female 11.1
Sample B Female 9.2
Sample C Male 13.9
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.2
Sample A Male 14.3
Sample B Male 15.3
Sample C Female 15.1
Sample D Female 11.2
Hippocampal formation
nTPM: 13.8
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.0
Sample A Male 11.0
Sample B Male 12.7
Sample C Female 15.3
Sample D Female 16.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
69080052 Antisense, RP_050324_01_G03, Mouse strain C57BL/6J (56 days, male) 14.8

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