HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:49.2 nTPM
HPA Brain:369.7 nTPM
GTEx:49.2 nTPM
FANTOM5:19.4 Scaled Tags Per Million
Pig:109.7 nTPM
Mouse:51.0 nTPM
Allen mouse:6.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 369.7
Sample id Sample description nTPM
Hippocampus
nTPM: 316.6
2148 Female, age 91, left hemisphere 369.8
2529 Female, age 94, left hemisphere 339.1
1911 Female, age 85, right hemisphere 325.1
1855 Male, age 76, left hemisphere 296.4
1898 Male, age 80, left hemisphere 287.3
2621 Female, age 67, right hemisphere 281.9
Dentate gyrus
nTPM: 312.3
2010 Male, age 76, both hemispheres 335.0
2528 Male, age 74, both hemispheres 332.4
2246 Female, age 85, both hemispheres 329.8
2531 Female, age 67, both hemispheres 312.4
1927 Female, age 91, both hemispheres 293.4
2530 Female, age 94, left hemisphere 271.1
Entorhinal gyrus
nTPM: 286.9
2117 Female, age 91, right hemisphere 301.0
2613 Female, age 94, left hemisphere 287.6
1938 Female, age 85, left hemisphere 286.9
2764 Male, age 80, right hemisphere 285.8
2686 Male, age 75, right hemisphere 283.4
1787 Male, age 76, left hemisphere 277.0
Hippocampus, CA1
nTPM: 369.7
2045 Male, age 76, both hemispheres 434.7
2749 Male, age 80, left hemisphere 415.0
1873 Female, age 85, both hemispheres 341.6
2527 Male, age 74, both hemispheres 335.5
2082 Female, age 91, right hemisphere 321.8
Hippocampus, CA2
nTPM: 306.6
1940 Female, age 85, left hemisphere 371.8
2113 Female, age 91, right hemisphere 308.4
2249 Male, age 74, both hemispheres 306.4
1892 Male, age 76, both hemispheres 295.8
1963 Male, age 80, left hemisphere 293.7
2437 Female, age 94, left hemisphere 263.7
Hippocampus, CA3
nTPM: 320.4
2137 Male, age 80, left hemisphere 353.2
2620 Female, age 94, left hemisphere 332.7
1891 Female, age 85, both hemispheres 331.4
1867 Male, age 76, both hemispheres 329.0
2861 Female, age 67, both hemispheres 303.9
2436 Male, age 74, both hemispheres 272.2
Parahippocampal cortex
nTPM: 294.9
2622 Female, age 67, right hemisphere 324.5
1933 Female, age 85, both hemispheres 319.1
2692 Male, age 74, both hemispheres 311.3
2693 Female, age 94, both hemispheres 306.6
2250 Female, age 67, right hemisphere 297.4
2245 Female, age 91, both hemispheres 289.3
2532 Female, age 72, left hemisphere 282.8
1850 Male, age 80, both hemispheres 278.9
2018 Male, age 76, both hemispheres 271.3
1990 Female, age 91, right hemisphere 267.8
Perirhinal gyrus
nTPM: 306.7
2521 Female, age 94, right hemisphere 352.1
1841 Female, age 85, right hemisphere 303.8
2848 Male, age 76, right hemisphere 299.8
1847 Female, age 91, left hemisphere 292.4
1794 Male, age 80, right hemisphere 285.1
Subiculum
nTPM: 304.4
2729 Female, age 91, right hemisphere 355.8
2619 Male, age 74, both hemispheres 323.8
1977 Female, age 85, both hemispheres 291.0
2438 Female, age 94, left hemisphere 290.1
1901 Male, age 80, both hemispheres 284.7
2042 Male, age 76, both hemispheres 281.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 49.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.2
Samples: 255

Max nTPM: 90.5
Min nTPM: 22.6
Std nTPM: 10.1
Median nTPM: 47.7
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 90.5
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 84.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 80.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 76.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 73.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 73.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 73.4
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 73.0
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 72.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 68.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 19.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.4
FF:10153-102I9 76 years, female 21.2
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 109.7
Pig sample Sample description nTPM
Subiculum
nTPM: 91.0
Samples: 4

Max nTPM: 110.1
Min nTPM: 81.6
Sample A Female 110.1
Sample B Female 86.7
Sample C Male 85.4
Sample D Male 81.6
Dorsal hippocampus
nTPM: 109.8
Samples: 4

Max nTPM: 120.9
Min nTPM: 100.1
Sample A Female 120.9
Sample B Female 113.8
Sample C Male 104.2
Sample D Male 100.1
Entorhinal cortex
nTPM: 106.8
Samples: 4

Max nTPM: 111.3
Min nTPM: 102.8
Sample A Female 111.3
Sample B Female 107.8
Sample C Male 102.8
Sample D Male 105.3
Ventral hippocampus
nTPM: 96.8
Samples: 4

Max nTPM: 115.8
Min nTPM: 82.1
Sample A Female 95.6
Sample B Female 82.1
Sample C Male 93.5
Sample D Male 115.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 51.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.4
Samples: 4

Max nTPM: 52.6
Min nTPM: 45.4
Sample A Male 46.9
Sample B Male 48.5
Sample C Female 45.4
Sample D Female 52.6
Hippocampal formation
nTPM: 51.0
Samples: 4

Max nTPM: 57.7
Min nTPM: 44.1
Sample A Male 44.1
Sample B Male 54.6
Sample C Female 57.7
Sample D Female 47.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
1994 Antisense, RP_Baylor_103380, Mouse strain C57BL/6J (56 days, male) 7.2
69012795 Antisense, RP_050309_01_E04, Mouse strain C57BL/6J (56 days, male) 6.0
1995 Antisense, RP_Baylor_103380, Mouse strain C57BL/6J (56 days, male) 5.3

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