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NDUFV2
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • NDUFV2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:113.5 nTPM
FANTOM5:104.6 Scaled Tags Per Million
Pig:52.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003404Antibody HPA077896
Glial cells Not detectedNot detected
Neuronal cells HighLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 113.5
Samples: 300

Max nTPM: 236.7
Min nTPM: 61.2
Std nTPM: 27.1
Median nTPM: 109.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 236.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 231.4
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 224.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 214.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 199.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 195.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 195.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 193.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 193.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 172.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 167.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 166.7
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 162.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 159.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 159.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 157.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 153.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 153.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 152.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 151.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 151.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 151.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 150.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 150.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 149.4
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 149.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 148.3
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 147.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 147.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 147.3
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 146.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 145.9
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 145.1
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 142.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 141.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 140.2
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 140.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 139.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 139.7
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 139.5
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 138.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 138.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 136.9
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 136.3
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 135.8
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 134.9
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 134.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 134.7
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 134.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 134.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 134.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 134.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 133.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 133.2
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 132.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 132.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 132.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 132.0
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 131.8
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 131.2
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 131.1
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 130.8
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 130.5
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 130.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 130.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 129.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 128.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 128.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 128.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 128.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 128.3
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 128.3
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 128.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 128.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 128.0
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 127.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 127.9
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 127.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 127.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 126.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 125.4
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 125.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 124.9
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 124.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 124.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 124.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 123.7
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 123.5
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 122.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 122.7
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 122.7
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 122.4
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 121.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 121.2
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 121.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 120.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 119.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 119.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 119.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 118.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 118.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 118.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 117.9
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 117.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 117.4
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 117.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 116.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 116.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 115.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 115.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 115.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 115.4
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 115.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 114.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 114.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 114.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 114.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 114.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 114.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 114.2
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 114.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 113.9
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 113.8
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 113.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 113.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 113.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 113.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 112.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 112.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 112.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 112.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 112.2
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 111.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 111.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 111.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 111.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 111.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 111.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 111.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 110.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 110.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 110.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 110.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 110.6
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 110.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 110.0
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 110.0
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 109.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 109.6
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 109.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 109.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 109.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 109.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 109.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 108.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 108.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 108.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 108.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 108.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 108.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 108.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 107.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 107.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 107.7
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 107.5
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 107.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 107.4
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 107.0
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 107.0
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 106.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 106.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 105.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.4
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 105.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 105.1
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 105.1
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 104.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 104.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 104.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 104.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 104.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 104.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 103.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 103.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 103.7
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 103.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 103.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 102.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 102.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 102.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 102.3
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 102.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 102.0
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 101.8
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 101.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 101.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 101.5
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 101.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 101.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 101.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 101.1
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 101.0
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 100.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 100.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 99.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 99.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 99.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 99.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 98.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 98.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 98.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 97.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 97.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 97.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 97.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 97.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 97.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 97.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 97.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 96.8
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 96.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 96.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 96.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 96.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 95.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 95.4
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 95.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 95.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 95.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 95.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 95.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 94.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 94.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 94.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 94.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 93.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 93.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 93.1
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 93.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 92.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 92.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 91.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 91.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 91.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 90.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 90.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 89.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 89.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 89.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 89.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 89.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 88.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 88.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 88.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 87.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 87.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 87.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 87.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 86.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 86.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 86.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 86.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 85.7
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 85.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 85.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 85.4
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 85.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 85.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 84.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 84.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.2
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 83.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 82.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 81.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 81.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 81.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 81.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 81.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 81.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 81.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 81.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 81.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 80.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 79.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 78.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 77.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 76.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 76.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 75.8
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 72.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 72.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 71.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 68.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 67.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 66.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 61.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

104.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 104.6
FF:10164-103B2 76 years, female 104.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.2
Pig sample Sample description nTPM
Caudate
nTPM: 52.2
Samples: 4

Max nTPM: 55.0
Min nTPM: 50.2
Sample A Female 50.2
Sample B Female 52.7
Sample C Male 55.0
Sample D Male 50.9

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