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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:61.8 nTPM
HPA Brain:77.2 nTPM
GTEx:61.8 nTPM
Pig:34.7 nTPM
Mouse:58.9 nTPM
Allen mouse:4.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 77.2
2226 Male, age 75, left hemisphere 88.5
1961 Female, age 42, unknown 65.9
Dorsomedial nucleus
nTPM: 61.9
2041 Female, age 72, unknown 67.7
1989 Male, age 62, unknown 67.4
2017 Female, age 42, unknown 50.7
Lateral hypothalamic area
nTPM: 68.6
1791 Male, age 80, right hemisphere 84.9
2228 Male, age 66, unknown 72.4
2271 Male, age 75, both hemispheres 61.1
2412 Male, age 62, unknown 56.0
Mammillary body
nTPM: 57.4
1923 Female, age 72, unknown 73.0
2413 Male, age 66, unknown 69.7
1948 Female, age 72, unknown 52.1
1834 Female, age 42, unknown 46.0
1945 Male, age 80, right hemisphere 46.0
Paraventricular nucleus
nTPM: 39.4
2700 Male, age 62, unknown 39.4
Preoptic area
nTPM: 52.7
1907 Male, age 80, right hemisphere 65.2
1861 Female, age 42, unknown 46.7
2414 Female, age 72, unknown 46.2
Supraoptic nucleus
nTPM: 52.3
1894 Female, age 72, unknown 56.2
2835 Female, age 72, unknown 52.1
2043 Male, age 62, unknown 48.7
Ventromedial nucleus
nTPM: 62.6
1982 Female, age 72, unknown 69.9
1822 Female, age 42, unknown 55.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 61.8
Samples: 257

Max nTPM: 104.2
Min nTPM: 24.5
Std nTPM: 14.6
Median nTPM: 62.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 104.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 100.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 96.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 94.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 93.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 91.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 89.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 89.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 89.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 88.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 87.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 86.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 85.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 84.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 83.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 83.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 83.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 82.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 81.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 81.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 80.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 80.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 80.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 80.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 80.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 79.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 79.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 78.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 78.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 78.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 77.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 77.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 77.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 77.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 77.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 77.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 77.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 77.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 76.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 76.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 76.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 76.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 76.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 76.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 75.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 75.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 75.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 75.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 75.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 75.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 74.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 74.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 73.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 73.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 73.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 73.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 73.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 73.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 72.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 72.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 72.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 72.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 72.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 71.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 71.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 71.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 71.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 71.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 71.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 71.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 70.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 70.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 70.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 70.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 70.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 69.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 69.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 69.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 69.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 69.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 69.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 69.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 69.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 69.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 69.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 68.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 68.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 68.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 68.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 68.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 68.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 68.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 67.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 67.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 67.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 67.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 67.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 67.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 66.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 66.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 66.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 66.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 66.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 66.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 66.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 66.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 65.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 65.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 65.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 65.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 64.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 64.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 64.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 64.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 64.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 64.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 63.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 63.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 63.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 63.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 63.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 63.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 63.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 62.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 62.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 62.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 62.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 62.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 62.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 62.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 62.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 62.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 61.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 61.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 61.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 61.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 60.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 60.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 60.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 60.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 60.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 60.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 60.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 60.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 60.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 60.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 59.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 59.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 59.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 59.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 59.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 59.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 59.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 58.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 58.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 58.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 58.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 58.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 58.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 58.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 58.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 57.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 57.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 57.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 57.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 57.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 56.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 56.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 56.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 56.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 55.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 55.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 55.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 55.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 55.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 54.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 54.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 54.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 54.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 54.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 54.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 54.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 53.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 53.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 53.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 52.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 52.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 52.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 52.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 52.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 52.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 52.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 51.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 51.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 51.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 51.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 51.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 50.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 50.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 50.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 49.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 48.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 48.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 48.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 48.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 48.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 48.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 48.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 47.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 47.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 47.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 47.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 47.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 46.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 46.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 46.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 45.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 45.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 45.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 44.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 44.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 44.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 43.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 43.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 43.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 43.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 43.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 43.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 43.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 43.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 43.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 42.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 42.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 42.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 42.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 42.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 41.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 41.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 39.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 39.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 38.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 38.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 38.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 37.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 37.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 36.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 36.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 35.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 35.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 34.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 33.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 33.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 30.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 30.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 26.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 24.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 24.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 34.7
Samples: 4

Max nTPM: 42.4
Min nTPM: 30.3
Sample A Female 42.4
Sample B Female 32.9
Sample C Male 33.3
Sample D Male 30.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 58.9
Samples: 4

Max nTPM: 64.7
Min nTPM: 51.6
Sample A Male 64.7
Sample B Male 64.3
Sample C Female 55.1
Sample D Female 51.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.7
69443130 Antisense, RP_050414_03_E03, Mouse strain C57BL/6J (56 days, male) 4.7

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