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  • TISSUE

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  • ACTG1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:751.0 nTPM
HPA Brain:1036.9 nTPM
GTEx:751.0 nTPM
Pig:1086.7 nTPM
Mouse:1312.9 nTPM
Allen mouse:18.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1036.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 695.7
2226 Male, age 75, left hemisphere 709.6
1961 Female, age 42, unknown 681.7
Dorsomedial nucleus
nTPM: 650.2
1989 Male, age 62, unknown 734.8
2041 Female, age 72, unknown 618.3
2017 Female, age 42, unknown 597.5
Lateral hypothalamic area
nTPM: 1036.9
1791 Male, age 80, right hemisphere 1233.1
2271 Male, age 75, both hemispheres 1200.8
2228 Male, age 66, unknown 1096.1
2412 Male, age 62, unknown 617.6
Mammillary body
nTPM: 752.8
1923 Female, age 72, unknown 884.0
2413 Male, age 66, unknown 789.8
1948 Female, age 72, unknown 741.0
1945 Male, age 80, right hemisphere 683.8
1834 Female, age 42, unknown 665.6
Paraventricular nucleus
nTPM: 580.8
2700 Male, age 62, unknown 580.8
Preoptic area
nTPM: 757.3
1907 Male, age 80, right hemisphere 821.7
2414 Female, age 72, unknown 741.1
1861 Female, age 42, unknown 709.1
Supraoptic nucleus
nTPM: 847.1
1894 Female, age 72, unknown 862.0
2043 Male, age 62, unknown 846.0
2835 Female, age 72, unknown 833.4
Ventromedial nucleus
nTPM: 673.1
1982 Female, age 72, unknown 742.5
1822 Female, age 42, unknown 603.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

751.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 751.0
Samples: 257

Max nTPM: 1837.2
Min nTPM: 409.0
Std nTPM: 190.9
Median nTPM: 716.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1837.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1524.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1423.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 1354.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 1317.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 1310.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1302.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1285.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1257.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 1221.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1194.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1169.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 1116.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1081.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1069.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1067.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 1062.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1054.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1035.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1012.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1003.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 994.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 992.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 984.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 976.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 967.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 965.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 960.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 954.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 953.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 942.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 933.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 926.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 923.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 922.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 915.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 912.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 912.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 896.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 895.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 889.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 886.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 884.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 883.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 878.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 873.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 864.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 864.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 863.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 854.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 854.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 846.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 845.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 841.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 840.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 839.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 837.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 835.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 834.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 834.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 834.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 831.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 831.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 828.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 827.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 825.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 819.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 817.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 815.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 814.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 812.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 811.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 808.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 804.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 801.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 800.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 790.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 790.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 789.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 788.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 786.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 785.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 782.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 782.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 780.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 779.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 778.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 775.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 775.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 773.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 770.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 770.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 770.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 769.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 767.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 766.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 765.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 763.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 762.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 762.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 760.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 753.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 751.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 751.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 751.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 749.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 748.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 746.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 746.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 744.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 742.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 738.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 737.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 737.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 737.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 736.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 735.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 734.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 731.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 730.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 729.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 729.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 728.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 727.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 722.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 722.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 719.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 717.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 716.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 715.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 713.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 713.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 711.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 710.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 708.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 706.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 703.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 698.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 698.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 695.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 694.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 694.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 693.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 693.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 686.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 686.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 684.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 684.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 684.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 683.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 682.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 682.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 680.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 680.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 678.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 678.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 675.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 672.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 670.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 670.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 668.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 667.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 666.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 666.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 665.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 665.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 663.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 662.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 660.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 659.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 658.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 658.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 658.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 657.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 657.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 657.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 656.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 654.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 653.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 651.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 648.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 647.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 644.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 643.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 640.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 637.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 637.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 637.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 637.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 637.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 636.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 634.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 631.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 631.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 631.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 629.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 625.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 625.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 623.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 623.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 622.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 622.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 620.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 616.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 614.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 612.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 611.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 607.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 607.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 606.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 601.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 594.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 594.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 592.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 589.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 584.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 583.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 582.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 582.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 579.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 578.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 577.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 576.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 575.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 573.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 570.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 570.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 566.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 564.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 563.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 562.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 561.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 560.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 554.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 552.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 551.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 550.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 546.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 541.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 540.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 536.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 532.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 527.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 526.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 525.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 523.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 519.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 518.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 517.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 511.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 503.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 500.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 492.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 473.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 471.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 436.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 409.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1086.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1086.8
Samples: 4

Max nTPM: 1417.6
Min nTPM: 797.8
Sample A Female 1417.6
Sample B Female 1081.7
Sample C Male 1049.9
Sample D Male 797.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1312.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1312.9
Samples: 4

Max nTPM: 1395.8
Min nTPM: 1259.6
Sample A Male 1299.0
Sample B Male 1395.8
Sample C Female 1297.3
Sample D Female 1259.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.1
67792203 Antisense, RP_040920_01_D11, Mouse strain C57BL/6J (56 days, male) 18.1

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