HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:25.9 nTPM
HPA Brain:37.8 nTPM
GTEx:25.9 nTPM
FANTOM5:202.4 Scaled Tags Per Million
Pig:70.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042205Antibody HPA043013Antibody HPA048671
Glial cells HighHighMedium
Neuronal cells HighHighMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.8
Sample id Sample description nTPM
Hippocampus
nTPM: 33.9
1855 Male, age 76, left hemisphere 39.8
1911 Female, age 85, right hemisphere 36.1
2529 Female, age 94, left hemisphere 34.9
1898 Male, age 80, left hemisphere 33.7
2621 Female, age 67, right hemisphere 30.3
2148 Female, age 91, left hemisphere 28.5
Dentate gyrus
nTPM: 30.7
2530 Female, age 94, left hemisphere 35.1
2528 Male, age 74, both hemispheres 33.7
2246 Female, age 85, both hemispheres 33.4
2010 Male, age 76, both hemispheres 33.3
2531 Female, age 67, both hemispheres 28.1
1927 Female, age 91, both hemispheres 20.6
Entorhinal gyrus
nTPM: 29.0
2117 Female, age 91, right hemisphere 44.4
2764 Male, age 80, right hemisphere 28.7
1787 Male, age 76, left hemisphere 27.8
1938 Female, age 85, left hemisphere 27.0
2686 Male, age 75, right hemisphere 26.4
2613 Female, age 94, left hemisphere 19.8
Hippocampus, CA1
nTPM: 34.2
2749 Male, age 80, left hemisphere 39.7
1873 Female, age 85, both hemispheres 33.8
2045 Male, age 76, both hemispheres 33.8
2527 Male, age 74, both hemispheres 31.9
2082 Female, age 91, right hemisphere 31.5
Hippocampus, CA2
nTPM: 32.5
2249 Male, age 74, both hemispheres 35.9
1940 Female, age 85, left hemisphere 35.5
1963 Male, age 80, left hemisphere 33.9
1892 Male, age 76, both hemispheres 32.2
2113 Female, age 91, right hemisphere 30.4
2437 Female, age 94, left hemisphere 26.8
Hippocampus, CA3
nTPM: 33.3
2436 Male, age 74, both hemispheres 46.4
2137 Male, age 80, left hemisphere 39.6
1891 Female, age 85, both hemispheres 35.8
1867 Male, age 76, both hemispheres 32.8
2861 Female, age 67, both hemispheres 23.2
2620 Female, age 94, left hemisphere 21.9
Parahippocampal cortex
nTPM: 26.9
2532 Female, age 72, left hemisphere 31.1
2018 Male, age 76, both hemispheres 30.6
2245 Female, age 91, both hemispheres 30.1
2692 Male, age 74, both hemispheres 27.9
1933 Female, age 85, both hemispheres 27.3
1990 Female, age 91, right hemisphere 27.1
2250 Female, age 67, right hemisphere 26.4
1850 Male, age 80, both hemispheres 24.6
2622 Female, age 67, right hemisphere 22.3
2693 Female, age 94, both hemispheres 21.6
Perirhinal gyrus
nTPM: 23.9
2521 Female, age 94, right hemisphere 27.1
2848 Male, age 76, right hemisphere 25.5
1794 Male, age 80, right hemisphere 22.9
1841 Female, age 85, right hemisphere 22.6
1847 Female, age 91, left hemisphere 21.4
Subiculum
nTPM: 37.8
2042 Male, age 76, both hemispheres 54.2
1901 Male, age 80, both hemispheres 39.3
2438 Female, age 94, left hemisphere 35.7
1977 Female, age 85, both hemispheres 33.8
2619 Male, age 74, both hemispheres 32.2
2729 Female, age 91, right hemisphere 31.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 25.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.9
Samples: 255

Max nTPM: 78.3
Min nTPM: 8.7
Std nTPM: 11.9
Median nTPM: 23.4
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 78.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 73.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 70.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 68.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 62.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 60.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 60.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 55.7
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 54.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 54.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 54.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 202.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 202.4
FF:10153-102I9 76 years, female 265.7
FF:10169-103B7 60 years, female 139.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 70.2
Pig sample Sample description nTPM
Subiculum
nTPM: 62.8
Samples: 4

Max nTPM: 89.5
Min nTPM: 48.8
Sample A Female 89.5
Sample B Female 54.7
Sample C Male 58.1
Sample D Male 48.8
Dorsal hippocampus
nTPM: 70.2
Samples: 4

Max nTPM: 92.1
Min nTPM: 56.6
Sample A Female 92.1
Sample B Female 71.1
Sample C Male 56.6
Sample D Male 60.9
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 72.8
Min nTPM: 38.5
Sample A Female 59.0
Sample B Female 72.8
Sample C Male 63.6
Sample D Male 38.5
Ventral hippocampus
nTPM: 65.2
Samples: 4

Max nTPM: 88.5
Min nTPM: 49.5
Sample A Female 62.7
Sample B Female 49.5
Sample C Male 88.5
Sample D Male 60.0

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