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  • SUMMARY

  • TISSUE

  • BRAIN

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  • CDK10
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:34.5 nTPM
HPA Brain:13.0 nTPM
GTEx:34.5 nTPM
Pig:29.8 nTPM
Mouse:30.6 nTPM
Allen mouse:3.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 13.0
1961 Female, age 42, unknown 14.1
2226 Male, age 75, left hemisphere 12.0
Dorsomedial nucleus
nTPM: 11.3
2017 Female, age 42, unknown 14.2
2041 Female, age 72, unknown 10.2
1989 Male, age 62, unknown 9.4
Lateral hypothalamic area
nTPM: 8.0
2412 Male, age 62, unknown 9.3
2271 Male, age 75, both hemispheres 8.2
2228 Male, age 66, unknown 7.4
1791 Male, age 80, right hemisphere 7.0
Mammillary body
nTPM: 7.0
2413 Male, age 66, unknown 8.4
1945 Male, age 80, right hemisphere 7.8
1834 Female, age 42, unknown 6.4
1923 Female, age 72, unknown 6.3
1948 Female, age 72, unknown 6.3
Paraventricular nucleus
nTPM: 7.7
2700 Male, age 62, unknown 7.7
Preoptic area
nTPM: 8.5
1907 Male, age 80, right hemisphere 9.5
2414 Female, age 72, unknown 8.3
1861 Female, age 42, unknown 7.8
Supraoptic nucleus
nTPM: 7.9
2835 Female, age 72, unknown 8.6
2043 Male, age 62, unknown 8.3
1894 Female, age 72, unknown 6.7
Ventromedial nucleus
nTPM: 10.7
1822 Female, age 42, unknown 11.2
1982 Female, age 72, unknown 10.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 34.5
Samples: 257

Max nTPM: 96.6
Min nTPM: 5.6
Std nTPM: 17.0
Median nTPM: 31.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 96.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 95.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 90.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 87.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 81.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 80.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 80.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 76.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 75.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 74.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 72.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 69.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 67.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 67.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 64.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 64.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 62.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 61.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 60.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 60.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 59.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 58.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 58.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 58.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 58.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 57.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 57.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 55.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 55.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 55.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 54.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 54.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 53.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 53.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 52.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 52.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 52.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 51.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 51.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 51.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 51.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 51.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 50.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 50.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 50.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 50.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 49.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 48.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 47.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 47.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 47.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 46.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 46.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 46.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 45.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 45.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 44.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 44.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 44.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 43.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 43.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 43.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 43.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 43.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 43.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 43.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 42.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 42.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 42.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 42.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 41.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 40.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 40.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 40.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 40.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 40.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 40.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 40.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 40.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 39.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 39.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 39.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 39.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 39.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 39.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 39.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 39.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 38.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 38.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 37.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 37.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 37.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 37.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 37.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 37.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 36.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 36.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 36.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 36.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 36.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 36.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 36.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 35.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 35.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 35.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 35.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 35.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 35.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 35.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 35.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 34.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 34.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 34.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 34.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 34.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 33.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 33.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 33.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 33.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 33.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 33.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 33.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 33.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 33.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 33.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 32.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 32.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 31.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 31.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 31.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 31.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 31.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 31.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 30.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 30.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 30.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 30.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 30.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 30.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 29.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 29.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 29.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 29.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 28.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 28.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 28.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 28.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 28.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 28.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 28.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 27.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 27.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 27.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 27.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 27.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 26.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 26.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 26.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 26.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 26.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 26.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 26.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 26.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 26.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 26.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 25.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 25.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 25.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 24.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 24.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 24.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 24.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 24.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 24.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 24.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 24.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 23.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 23.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 23.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 23.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 23.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 23.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 23.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 23.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 22.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 22.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 22.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 22.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 22.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 22.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 22.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 22.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 22.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 22.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 22.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 21.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 21.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 21.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 21.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 21.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 20.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 20.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 20.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 20.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 20.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 20.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 19.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 19.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 19.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 19.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 19.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 19.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 19.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 19.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 18.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 18.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 18.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 18.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 18.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 17.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 17.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 17.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 17.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 17.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 17.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 17.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 17.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 17.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 17.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 16.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 16.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 16.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 16.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 15.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 15.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 15.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 15.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 15.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 15.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 14.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 14.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 14.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 13.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 13.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 13.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 13.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 12.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 11.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 11.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 11.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 9.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 9.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 9.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 9.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 8.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 6.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 5.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 29.8
Samples: 4

Max nTPM: 33.5
Min nTPM: 24.6
Sample A Female 33.5
Sample B Female 28.9
Sample C Male 32.2
Sample D Male 24.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 30.6
Samples: 4

Max nTPM: 32.7
Min nTPM: 28.2
Sample A Male 32.7
Sample B Male 31.9
Sample C Female 28.2
Sample D Female 29.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.3
74735277 Antisense, RP_060302_01_D01, Mouse strain C57BL/6J (56 days, male) 3.3

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