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  • TISSUE

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  • CHP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:36.1 nTPM
HPA Brain:82.0 nTPM
GTEx:36.1 nTPM
Pig:71.4 nTPM
Mouse:155.7 nTPM
Allen mouse:7.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 72.6
2226 Male, age 75, left hemisphere 78.9
1961 Female, age 42, unknown 66.3
Dorsomedial nucleus
nTPM: 65.8
2041 Female, age 72, unknown 71.8
1989 Male, age 62, unknown 67.6
2017 Female, age 42, unknown 58.1
Lateral hypothalamic area
nTPM: 82.0
2271 Male, age 75, both hemispheres 92.4
1791 Male, age 80, right hemisphere 86.3
2412 Male, age 62, unknown 76.5
2228 Male, age 66, unknown 72.5
Mammillary body
nTPM: 69.7
1923 Female, age 72, unknown 78.7
1948 Female, age 72, unknown 71.3
2413 Male, age 66, unknown 71.0
1945 Male, age 80, right hemisphere 65.2
1834 Female, age 42, unknown 62.4
Paraventricular nucleus
nTPM: 58.5
2700 Male, age 62, unknown 58.5
Preoptic area
nTPM: 66.3
1907 Male, age 80, right hemisphere 70.4
1861 Female, age 42, unknown 66.7
2414 Female, age 72, unknown 61.9
Supraoptic nucleus
nTPM: 66.7
2835 Female, age 72, unknown 74.0
2043 Male, age 62, unknown 64.3
1894 Female, age 72, unknown 61.9
Ventromedial nucleus
nTPM: 81.0
1982 Female, age 72, unknown 89.6
1822 Female, age 42, unknown 72.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 36.1
Samples: 257

Max nTPM: 75.8
Min nTPM: 15.9
Std nTPM: 10.0
Median nTPM: 34.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 75.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 67.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 66.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 64.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 63.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 62.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 61.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 59.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 58.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 56.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 55.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 55.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 54.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 54.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 54.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 53.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 52.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 52.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 50.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 50.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 50.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 50.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 50.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 50.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 50.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 49.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 49.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 49.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 49.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 48.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 48.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 48.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 48.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 47.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 47.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 46.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 46.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 46.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 46.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 46.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 46.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 45.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 45.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 45.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 45.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 45.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 44.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 44.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 44.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 44.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 44.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 44.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 44.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 43.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 43.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 43.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 43.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 43.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 42.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 42.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 42.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 42.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 42.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 41.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 41.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 41.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 41.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 41.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 41.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 41.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 41.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 41.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 40.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 40.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 40.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 40.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 40.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 40.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 40.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 39.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 39.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 39.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 39.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 39.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 39.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 39.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 38.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 38.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 38.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 38.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 38.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 38.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 38.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 38.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 38.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 38.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 38.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 38.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 38.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 37.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 37.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 37.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 37.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 37.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 37.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 37.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 36.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 36.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 36.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 36.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 36.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 36.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 36.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 36.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 35.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 35.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 35.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 35.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 35.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 35.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 35.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 35.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 35.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 35.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 35.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 34.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 34.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 34.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 34.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 34.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 34.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 34.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 34.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 34.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 34.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 34.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 33.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 33.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 33.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 33.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 33.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 33.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 33.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 33.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 33.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 33.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 32.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 32.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 32.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 32.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 32.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 32.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 32.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 32.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 32.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 32.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 32.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 32.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 32.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 31.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 31.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 31.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 31.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 31.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 30.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 30.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 30.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 30.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 30.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 30.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 30.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 30.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 30.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 30.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 30.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 30.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 30.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 30.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 30.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 30.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 30.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 30.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 29.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 29.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 29.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 29.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 29.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 29.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 29.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 28.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 28.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 28.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 28.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 28.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 28.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 28.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 28.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 28.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 28.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 27.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 27.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 27.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 27.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 27.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 27.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 27.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 26.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 26.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 26.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 26.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 26.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 26.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 26.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 26.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 26.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 25.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 25.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 25.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 25.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 25.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 25.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 25.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 24.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 24.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 24.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 24.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 24.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 24.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 24.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 24.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 24.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 24.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 23.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 23.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 23.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 23.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 23.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 23.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 23.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 23.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 22.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 22.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 22.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 22.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 22.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 21.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 21.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 20.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 20.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 20.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 19.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 19.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 15.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 71.4
Samples: 4

Max nTPM: 89.8
Min nTPM: 58.8
Sample A Female 89.8
Sample B Female 69.1
Sample C Male 67.8
Sample D Male 58.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 155.7
Samples: 4

Max nTPM: 159.3
Min nTPM: 151.7
Sample A Male 151.7
Sample B Male 159.3
Sample C Female 158.6
Sample D Female 153.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.1
71656674 Antisense, RP_050927_04_A07, Mouse strain C57BL/6J (56 days, male) 7.1

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