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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
230.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 189.2
2019
Male, age 18, unknown
272.3
2411
Female, age 72, unknown
229.1
2219
Male, age 76, both hemispheres
195.8
2828
Female, age 72, unknown
184.9
1827
Male, age 72, unknown
184.6
2586
Male, age 75, left hemisphere
182.9
1870
Female, age 42, unknown
167.1
1833
Male, age 53, unknown
167.0
1830
Male, age 51, unknown
157.1
2666
Male, age 74, left hemisphere
151.4
Dorsal raphe nucleus nTPM: 195.9
2298
Female, age 72, unknown
245.6
2750
Male, age 76, both hemispheres
202.4
1828
Male, age 53, unknown
194.7
2047
Male, age 72, unknown
169.7
2016
Female, age 72, unknown
167.0
Inferior colliculus nTPM: 200.1
2097
Female, age 72, unknown
267.7
1890
Male, age 53, unknown
249.2
1848
Female, age 42, unknown
157.2
2849
Male, age 72, unknown
126.4
Median raphe nucleus nTPM: 172.1
2220
Male, age 76, midline
172.1
Periaquaductal grey, anterior nTPM: 187.0
2502
Female, age 75, unknown
192.7
1795
Male, age 51, unknown
188.6
1947
Male, age 18, unknown
179.6
Periaquaductal grey, dorsal nTPM: 163.3
1831
Male, age 72, unknown
178.0
2850
Male, age 76, both hemispheres
171.6
2464
Female, age 72, unknown
165.4
1840
Male, age 53, unknown
138.0
Periaquaductal grey, lateral nTPM: 190.5
2272
Male, age 74, both hemispheres
257.6
2140
Male, age 76, both hemispheres
173.4
2053
Male, age 18, unknown
140.5
Pretectal area nTPM: 230.0
1817
Female, age 42, unknown
328.2
2007
Male, age 72, unknown
311.3
1816
Male, age 51, unknown
295.1
1815
Male, age 53, unknown
275.4
1944
Female, age 72, unknown
270.1
2273
Male, age 74, both hemispheres
240.0
2667
Female, age 75, unknown
198.9
2224
Female, age 72, unknown
193.8
2316
Male, age 76, right hemisphere
161.3
2825
Male, age 18, unknown
137.4
2407
Male, age 75, both hemispheres
118.6
Red nucleus nTPM: 225.6
2785
Male, age 18, unknown
274.9
1821
Female, age 72, unknown
274.0
2725
Female, age 75, unknown
270.8
2503
Female, age 72, unknown
249.9
1904
Male, age 53, unknown
247.2
1954
Female, age 42, unknown
227.4
2823
Male, age 76, right hemisphere
220.3
1865
Male, age 51, unknown
216.5
2769
Male, age 72, unknown
214.5
2227
Male, age 72, unknown
212.7
2588
Male, age 74, left hemisphere
153.0
2584
Male, age 75, left hemisphere
145.6
Substantia nigra nTPM: 223.8
1916
Female, age 42, unknown
378.0
1889
Female, age 72, unknown
267.4
1851
Male, age 51, unknown
263.4
2241
Male, age 72, unknown
257.3
2409
Female, age 72, unknown
240.0
2699
Male, age 18, unknown
198.8
1941
Male, age 53, unknown
194.6
2583
Male, age 75, right hemisphere
166.3
2590
Female, age 75, unknown
151.0
2665
Male, age 74, both hemispheres
121.2
Superior colliculus nTPM: 182.4
2087
Female, age 72, unknown
236.3
2261
Male, age 18, unknown
228.8
2668
Female, age 75, unknown
219.0
1913
Female, age 42, unknown
190.7
1796
Male, age 53, unknown
187.9
1995
Male, age 72, unknown
177.1
2587
Male, age 74, left hemisphere
174.7
1895
Male, age 76, right hemisphere
159.0
1839
Male, age 51, unknown
143.8
2664
Male, age 75, both hemispheres
106.5
Ventral tegmental area nTPM: 222.7
2410
Female, age 72, unknown
307.3
2218
Male, age 76, both hemispheres
268.8
1915
Female, age 42, unknown
247.2
1942
Male, age 51, unknown
192.6
2223
Female, age 72, unknown
160.7
2021
Male, age 53, unknown
159.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
121.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 121.9
Samples: 183
Max nTPM: 303.4
Min nTPM: 32.8
Std nTPM: 45.4
Median nTPM: 116.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
303.4
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
300.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
268.1
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
253.0
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
237.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
211.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
209.5
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
201.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
198.7
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
197.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
194.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
190.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
190.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
189.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
187.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
187.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
186.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
184.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
184.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
184.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
181.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
178.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
175.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
175.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
171.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
171.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
170.4
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
166.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
164.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
156.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
156.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
155.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
154.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
153.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
153.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
152.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
152.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
151.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
150.8
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
149.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
148.7
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
148.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
146.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
144.3
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
144.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
143.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
143.5
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
143.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
143.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
142.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
141.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
140.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
139.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
137.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
137.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
137.0
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
136.2
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
136.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
135.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
135.3
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
134.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
134.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
134.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
133.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
132.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
131.4
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
129.1
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
128.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
128.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
128.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
128.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
127.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
127.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
126.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
125.3
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
124.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
123.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
123.4
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
123.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
123.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
121.6
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
121.6
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
121.3
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
121.2
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
120.6
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
119.5
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
118.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
118.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
118.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
117.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
117.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
116.8
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
115.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
115.1
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
115.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
112.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
112.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
112.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
111.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
111.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
111.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
111.3
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
111.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
109.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
108.7
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
108.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
108.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
107.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
107.6
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
107.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
106.8
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
106.7
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
106.6
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
105.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
104.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
104.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
103.7
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
103.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
102.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
101.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
101.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
100.3
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
99.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
98.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
98.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
98.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
98.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
98.1
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
97.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
97.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
97.0
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
96.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
92.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
92.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
91.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
90.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
89.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
89.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
89.4
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
89.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
89.0
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
88.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
87.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
86.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
84.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
84.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
84.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
83.9
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
83.1
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
82.6
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
81.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
81.2
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
80.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
80.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
78.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
76.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
74.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
74.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
74.6
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
73.4
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
73.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
71.2
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
70.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
70.8
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
70.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
70.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
69.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
69.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
68.5
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
66.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
65.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
64.2
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
64.0
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
61.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
60.8
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
60.3
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
55.6
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
54.4
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
51.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
46.6
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
46.3
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
46.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
32.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
121.4
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 88.1
Samples: 4
Max nTPM: 107.4
Min nTPM: 61.3
Sample A
Female
106.8
Sample B
Female
61.3
Sample C
Male
107.4
Sample D
Male
76.9
Midbrain nTPM: 121.4
Samples: 4
Max nTPM: 190.3
Min nTPM: 66.8
Sample A
Female
136.7
Sample B
Female
66.8
Sample C
Male
190.3
Sample D
Male
91.6
Periaqueductal gray nTPM: 68.2
Samples: 3
Max nTPM: 72.5
Min nTPM: 61.0
Sample B
Female
71.1
Sample C
Male
72.5
Sample D
Male
61.0
Superior colliculi nTPM: 110.9
Samples: 4
Max nTPM: 165.0
Min nTPM: 72.3
Sample A
Female
101.6
Sample B
Female
72.3
Sample C
Male
165.0
Sample D
Male
104.7
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
128.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 128.0
Samples: 4
Max nTPM: 135.4
Min nTPM: 118.5
Sample A
Male
118.5
Sample B
Male
127.2
Sample C
Female
135.4
Sample D
Female
130.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.