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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
114.7
nTPM
HPA Brain:
35.7
nTPM
GTEx:
114.7
nTPM
FANTOM5:
85.3
Scaled Tags Per Million
Mouse:
405.8
nTPM
Allen mouse:
21.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
35.7
Sample id
Sample description
nTPM
Amygdala nTPM: 34.5
2517
Female, age 94, left hemisphere
36.3
2695
Female, age 67, right hemisphere
35.9
1987
Female, age 91, left hemisphere
34.5
2814
Male, age 76, right hemisphere
33.6
2514
Male, age 75, right hemisphere
32.3
Basal amygdala nTPM: 29.5
2827
Female, age 67, right hemisphere
37.8
2609
Male, age 75, right hemisphere
33.4
2685
Female, age 94, left hemisphere
30.6
2110
Male, age 80, left hemisphere
27.3
2243
Female, age 91, right hemisphere
24.1
1955
Male, age 76, both hemispheres
23.8
Central amygdala nTPM: 35.7
2515
Male, age 75, right hemisphere
45.2
2826
Female, age 94, left hemisphere
45.0
1905
Male, age 76, both hemispheres
32.9
2701
Female, age 91, right hemisphere
27.8
2239
Male, age 80, left hemisphere
27.5
Corticomedial amygdala nTPM: 29.1
2428
Male, age 75, right hemisphere
35.4
2535
Female, age 67, right hemisphere
32.5
2429
Female, age 94, left hemisphere
30.3
2829
Male, age 80, left hemisphere
28.5
2242
Female, age 91, right hemisphere
26.6
2240
Male, age 76, both hemispheres
21.6
Lateral amygdala nTPM: 35.2
2830
Female, age 67, right hemisphere
47.8
2516
Male, age 75, right hemisphere
40.1
2534
Female, age 94, left hemisphere
33.6
2255
Female, age 91, right hemisphere
30.2
2256
Male, age 80, left hemisphere
30.1
1883
Male, age 76, both hemispheres
29.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
114.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 114.7
Samples: 152
Max nTPM: 383.0
Min nTPM: 59.7
Std nTPM: 42.8
Median nTPM: 106.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
383.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
276.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
245.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
212.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
206.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
205.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
205.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
201.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
196.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
184.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
179.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
177.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
174.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
174.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
160.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
159.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
154.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
152.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
151.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
150.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
148.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
147.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
146.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
144.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
143.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
142.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
141.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
140.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
138.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
136.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
136.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
134.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
133.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
131.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
130.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
130.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
130.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
130.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
130.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
127.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
127.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
126.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
126.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
125.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
125.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
125.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
124.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
124.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
121.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
121.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
120.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
120.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
119.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
118.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
118.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
116.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
115.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
113.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
113.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
112.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
112.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
111.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
111.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
110.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
110.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
109.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
108.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
108.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
107.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
107.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
107.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
107.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
106.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
106.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
106.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
106.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
106.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
104.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
104.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
104.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
103.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
103.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
103.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
102.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
101.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
101.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
100.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
100.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
100.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
100.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
100.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
100.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
99.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
98.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
98.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
98.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
97.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
96.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
95.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
95.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
95.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
95.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
94.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
94.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
93.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
93.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
93.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
93.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
93.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
92.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
91.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
90.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
89.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
88.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
88.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
88.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
88.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
85.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
85.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
84.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
83.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
83.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
82.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
82.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
82.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
81.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
80.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
80.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
79.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
79.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
78.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
76.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
75.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
75.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
75.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
73.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
72.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
71.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
71.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
69.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
69.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
69.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
68.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
68.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
68.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
67.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
67.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
66.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
66.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
61.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
60.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
59.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
405.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 405.8
Samples: 4
Max nTPM: 436.2
Min nTPM: 390.5
Sample A
Male
395.9
Sample B
Male
436.2
Sample C
Female
400.6
Sample D
Female
390.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.