HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:140.6 nTPM
HPA Brain:174.6 nTPM
GTEx:140.6 nTPM
FANTOM5:303.3 Scaled Tags Per Million
Pig:260.8 nTPM
Mouse:396.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043640Antibody HPA046280Antibody CAB005417Antibody CAB012406
Glial cells Not detectedNot detectedLowLow
Neuronal cells LowMediumLowMedium








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 174.6
Sample id Sample description nTPM
Hippocampus
nTPM: 103.4
1898 Male, age 80, left hemisphere 151.4
2621 Female, age 67, right hemisphere 118.5
2529 Female, age 94, left hemisphere 99.3
1855 Male, age 76, left hemisphere 87.7
2148 Female, age 91, left hemisphere 86.4
1911 Female, age 85, right hemisphere 77.0
Dentate gyrus
nTPM: 110.8
1927 Female, age 91, both hemispheres 126.0
2530 Female, age 94, left hemisphere 123.3
2246 Female, age 85, both hemispheres 116.0
2528 Male, age 74, both hemispheres 105.6
2531 Female, age 67, both hemispheres 99.9
2010 Male, age 76, both hemispheres 93.8
Entorhinal gyrus
nTPM: 137.8
2764 Male, age 80, right hemisphere 189.3
1938 Female, age 85, left hemisphere 162.9
2613 Female, age 94, left hemisphere 158.7
1787 Male, age 76, left hemisphere 122.3
2686 Male, age 75, right hemisphere 100.2
2117 Female, age 91, right hemisphere 93.2
Hippocampus, CA1
nTPM: 102.2
2749 Male, age 80, left hemisphere 126.3
2527 Male, age 74, both hemispheres 114.2
1873 Female, age 85, both hemispheres 100.8
2082 Female, age 91, right hemisphere 88.3
2045 Male, age 76, both hemispheres 81.6
Hippocampus, CA2
nTPM: 115.0
2437 Female, age 94, left hemisphere 137.8
2249 Male, age 74, both hemispheres 137.4
1892 Male, age 76, both hemispheres 119.1
1963 Male, age 80, left hemisphere 111.5
1940 Female, age 85, left hemisphere 101.9
2113 Female, age 91, right hemisphere 82.5
Hippocampus, CA3
nTPM: 114.7
2436 Male, age 74, both hemispheres 197.9
2137 Male, age 80, left hemisphere 109.0
1891 Female, age 85, both hemispheres 102.2
2861 Female, age 67, both hemispheres 99.7
1867 Male, age 76, both hemispheres 91.6
2620 Female, age 94, left hemisphere 87.7
Parahippocampal cortex
nTPM: 136.6
1850 Male, age 80, both hemispheres 184.4
1933 Female, age 85, both hemispheres 163.2
2250 Female, age 67, right hemisphere 148.3
2532 Female, age 72, left hemisphere 147.7
2245 Female, age 91, both hemispheres 144.1
2693 Female, age 94, both hemispheres 130.6
1990 Female, age 91, right hemisphere 129.6
2692 Male, age 74, both hemispheres 114.7
2622 Female, age 67, right hemisphere 109.7
2018 Male, age 76, both hemispheres 93.4
Perirhinal gyrus
nTPM: 174.6
1847 Female, age 91, left hemisphere 209.3
1794 Male, age 80, right hemisphere 182.8
1841 Female, age 85, right hemisphere 180.6
2521 Female, age 94, right hemisphere 150.8
2848 Male, age 76, right hemisphere 149.4
Subiculum
nTPM: 113.1
1977 Female, age 85, both hemispheres 153.5
2619 Male, age 74, both hemispheres 124.8
2438 Female, age 94, left hemisphere 122.9
1901 Male, age 80, both hemispheres 112.8
2042 Male, age 76, both hemispheres 88.0
2729 Female, age 91, right hemisphere 76.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 140.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 140.6
Samples: 255

Max nTPM: 293.6
Min nTPM: 62.1
Std nTPM: 44.8
Median nTPM: 131.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 293.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 272.3
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 270.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 263.0
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 245.1
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 244.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 237.7
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 237.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 232.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 228.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 225.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 303.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 303.3
FF:10169-103B7 60 years, female 340.6
FF:10153-102I9 76 years, female 266.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 260.8
Pig sample Sample description nTPM
Subiculum
nTPM: 260.8
Samples: 4

Max nTPM: 315.1
Min nTPM: 230.2
Sample A Female 315.1
Sample B Female 233.5
Sample C Male 230.2
Sample D Male 264.3
Dorsal hippocampus
nTPM: 239.5
Samples: 4

Max nTPM: 302.5
Min nTPM: 202.5
Sample A Female 302.5
Sample B Female 237.6
Sample C Male 202.5
Sample D Male 215.5
Entorhinal cortex
nTPM: 221.5
Samples: 4

Max nTPM: 267.9
Min nTPM: 191.4
Sample A Female 267.9
Sample B Female 201.9
Sample C Male 224.6
Sample D Male 191.4
Ventral hippocampus
nTPM: 229.3
Samples: 4

Max nTPM: 303.7
Min nTPM: 168.3
Sample A Female 268.0
Sample B Female 168.3
Sample C Male 303.7
Sample D Male 177.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 396.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 396.1
Samples: 4

Max nTPM: 490.8
Min nTPM: 347.2
Sample A Male 347.2
Sample B Male 391.8
Sample C Female 354.6
Sample D Female 490.8
Hippocampal formation
nTPM: 338.4
Samples: 4

Max nTPM: 366.5
Min nTPM: 321.7
Sample A Male 366.5
Sample B Male 321.7
Sample C Female 324.9
Sample D Female 340.4

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo