HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:57.5 nTPM
HPA Brain:144.0 nTPM
GTEx:57.5 nTPM
FANTOM5:15.3 Scaled Tags Per Million
Pig:91.6 nTPM
Mouse:69.7 nTPM
Allen mouse:6.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB013066
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 144.0
Sample id Sample description nTPM
Hippocampus
nTPM: 137.4
2621 Female, age 67, right hemisphere 157.8
1898 Male, age 80, left hemisphere 139.3
1855 Male, age 76, left hemisphere 136.0
2529 Female, age 94, left hemisphere 132.9
1911 Female, age 85, right hemisphere 132.4
2148 Female, age 91, left hemisphere 125.9
Dentate gyrus
nTPM: 140.0
2530 Female, age 94, left hemisphere 192.6
2010 Male, age 76, both hemispheres 148.5
2531 Female, age 67, both hemispheres 145.1
1927 Female, age 91, both hemispheres 128.4
2246 Female, age 85, both hemispheres 124.3
2528 Male, age 74, both hemispheres 101.2
Entorhinal gyrus
nTPM: 137.9
2613 Female, age 94, left hemisphere 158.3
2764 Male, age 80, right hemisphere 154.3
1787 Male, age 76, left hemisphere 135.9
2117 Female, age 91, right hemisphere 129.1
1938 Female, age 85, left hemisphere 127.2
2686 Male, age 75, right hemisphere 122.7
Hippocampus, CA1
nTPM: 141.6
2749 Male, age 80, left hemisphere 223.2
2527 Male, age 74, both hemispheres 129.4
1873 Female, age 85, both hemispheres 128.8
2045 Male, age 76, both hemispheres 120.0
2082 Female, age 91, right hemisphere 106.8
Hippocampus, CA2
nTPM: 130.1
1963 Male, age 80, left hemisphere 169.4
1892 Male, age 76, both hemispheres 149.3
2437 Female, age 94, left hemisphere 144.6
2249 Male, age 74, both hemispheres 111.3
2113 Female, age 91, right hemisphere 105.1
1940 Female, age 85, left hemisphere 100.9
Hippocampus, CA3
nTPM: 144.0
2137 Male, age 80, left hemisphere 183.3
2620 Female, age 94, left hemisphere 173.9
2861 Female, age 67, both hemispheres 156.8
1867 Male, age 76, both hemispheres 135.8
1891 Female, age 85, both hemispheres 122.7
2436 Male, age 74, both hemispheres 91.5
Parahippocampal cortex
nTPM: 131.3
2245 Female, age 91, both hemispheres 156.3
2532 Female, age 72, left hemisphere 151.2
2693 Female, age 94, both hemispheres 132.1
2622 Female, age 67, right hemisphere 129.9
2692 Male, age 74, both hemispheres 129.9
1990 Female, age 91, right hemisphere 128.8
1933 Female, age 85, both hemispheres 126.8
2250 Female, age 67, right hemisphere 120.9
2018 Male, age 76, both hemispheres 119.7
1850 Male, age 80, both hemispheres 117.3
Perirhinal gyrus
nTPM: 128.9
2521 Female, age 94, right hemisphere 144.1
1794 Male, age 80, right hemisphere 131.4
1847 Female, age 91, left hemisphere 127.8
2848 Male, age 76, right hemisphere 123.3
1841 Female, age 85, right hemisphere 117.9
Subiculum
nTPM: 139.2
2438 Female, age 94, left hemisphere 161.3
2042 Male, age 76, both hemispheres 159.6
1901 Male, age 80, both hemispheres 151.8
1977 Female, age 85, both hemispheres 143.2
2619 Male, age 74, both hemispheres 117.6
2729 Female, age 91, right hemisphere 101.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 57.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.5
Samples: 255

Max nTPM: 94.5
Min nTPM: 23.6
Std nTPM: 13.6
Median nTPM: 57.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 94.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 92.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 90.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 89.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 88.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 86.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 86.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 85.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 83.1
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 82.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 80.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.3
FF:10169-103B7 60 years, female 19.7
FF:10153-102I9 76 years, female 11.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 91.6
Pig sample Sample description nTPM
Subiculum
nTPM: 78.8
Samples: 4

Max nTPM: 104.5
Min nTPM: 64.2
Sample A Female 104.5
Sample B Female 75.0
Sample C Male 71.3
Sample D Male 64.2
Dorsal hippocampus
nTPM: 91.6
Samples: 4

Max nTPM: 117.6
Min nTPM: 64.3
Sample A Female 117.6
Sample B Female 91.4
Sample C Male 93.1
Sample D Male 64.3
Entorhinal cortex
nTPM: 85.4
Samples: 4

Max nTPM: 89.5
Min nTPM: 80.2
Sample A Female 89.5
Sample B Female 85.3
Sample C Male 86.4
Sample D Male 80.2
Ventral hippocampus
nTPM: 84.4
Samples: 4

Max nTPM: 99.8
Min nTPM: 58.2
Sample A Female 82.1
Sample B Female 58.2
Sample C Male 99.8
Sample D Male 97.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 69.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.6
Samples: 4

Max nTPM: 70.3
Min nTPM: 66.4
Sample A Male 66.4
Sample B Male 70.3
Sample C Female 68.0
Sample D Female 69.5
Hippocampal formation
nTPM: 69.7
Samples: 4

Max nTPM: 74.2
Min nTPM: 62.7
Sample A Male 62.7
Sample B Male 73.3
Sample C Female 74.2
Sample D Female 68.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
74359628 Antisense, RP_060207_01_B08, Mouse strain C57BL/6J (56 days, male) 12.4
74635590 Antisense, RP_060215_04_A09, Mouse strain C57BL/6J (56 days, male) 0.3

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