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TCEAL3
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  • TISSUE

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  • TCEAL3
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:213.0 nTPM
HPA Brain:66.8 nTPM
GTEx:213.0 nTPM
FANTOM5:210.9 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 60.0
2194 Female, age 79, both hemispheres 70.9
2565 Male, age 75, midline 63.1
2816 Male, age 47, midline 60.7
1981 Female, age 72, midline 54.6
2048 Male, age 55, midline 50.6
Cervical spinal cord, dorsal horn
nTPM: 49.0
2721 Male, age 90, both hemispheres 53.1
1877 Male, age 55, unknown 50.9
2297 Male, age 75, both hemispheres 48.9
2173 Female, age 72, unknown 48.0
2069 Male, age 47, both hemispheres 47.7
2296 Male, age 66, both hemispheres 45.2
Cervical spinal cord, ventral horn
nTPM: 66.8
2480 Male, age 75, both hemispheres 89.8
2820 Female, age 79, both hemispheres 74.8
2809 Male, age 90, both hemispheres 69.6
2295 Male, age 66, both hemispheres 64.2
2068 Male, age 55, unknown 62.4
2098 Female, age 72, unknown 39.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 213.0
Samples: 204

Max nTPM: 624.0
Min nTPM: 59.0
Std nTPM: 75.0
Median nTPM: 195.4
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 624.0
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 538.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 504.9
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 443.9
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 412.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 401.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 365.2
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 350.6
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 346.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 339.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 338.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 336.6
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 325.9
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 325.0
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 321.4
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 319.6
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 312.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 309.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 308.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 305.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 305.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 300.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 292.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 291.2
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 289.5
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 285.8
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 282.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 280.7
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 279.0
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 278.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 277.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 277.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 277.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 275.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 273.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 269.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 269.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 266.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 266.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 265.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 264.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 262.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 260.8
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 259.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 259.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 256.6
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 255.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 253.0
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 252.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 251.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 246.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 242.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 241.9
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 241.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 239.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 236.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 235.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 235.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 231.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 230.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 229.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 228.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 228.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 226.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 226.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 225.8
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 225.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 224.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 223.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 223.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 221.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 220.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 219.7
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 218.7
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 218.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 217.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 216.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 216.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 215.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 213.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 213.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 213.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 211.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 206.9
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 206.4
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 206.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 205.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 205.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 205.4
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 204.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 204.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 202.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 201.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 201.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 200.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 198.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 198.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 198.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 197.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 197.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 196.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 195.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 195.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 195.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 193.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 192.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 192.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 192.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 192.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 192.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 191.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 191.5
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 190.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 190.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 190.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 189.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 188.0
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 187.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 187.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 186.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 186.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 186.4
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 186.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 185.2
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 184.5
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 184.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 182.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 182.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 182.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 181.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 181.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 181.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 180.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 180.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 179.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 179.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 179.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 179.5
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 178.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 178.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 177.9
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 176.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 176.6
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 173.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 172.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 171.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 171.3
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 170.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 170.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 169.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 168.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 167.2
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 165.8
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 165.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 165.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 164.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 164.4
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 164.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 162.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 162.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 161.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 161.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 159.9
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 158.3
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 158.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 158.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 154.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 153.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 153.0
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 151.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 151.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 150.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 149.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 148.9
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 145.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 145.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 145.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 145.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 142.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 141.9
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 141.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 141.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 140.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 139.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 139.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 136.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 135.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 135.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 134.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 133.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 129.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 128.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 128.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 128.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 126.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 122.3
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 121.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 114.7
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 112.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 105.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 104.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 100.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 94.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 59.0
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

210.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 210.9
FF:10181-103D1 60 years, female 233.2
FF:10159-103A6 76 years, female 188.6

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