HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:764.3 nTPM
HPA Brain:207.8 nTPM
GTEx:764.3 nTPM
FANTOM5:247.8 Scaled Tags Per Million
Pig:153.3 nTPM
Mouse:485.8 nTPM
Allen mouse:15.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 207.8
Sample id Sample description nTPM
Hippocampus
nTPM: 207.8
2529 Female, age 94, left hemisphere 242.6
1898 Male, age 80, left hemisphere 231.5
1855 Male, age 76, left hemisphere 203.7
2621 Female, age 67, right hemisphere 199.8
1911 Female, age 85, right hemisphere 186.8
2148 Female, age 91, left hemisphere 182.2
Dentate gyrus
nTPM: 195.2
2530 Female, age 94, left hemisphere 267.7
2010 Male, age 76, both hemispheres 214.8
1927 Female, age 91, both hemispheres 188.3
2246 Female, age 85, both hemispheres 187.6
2531 Female, age 67, both hemispheres 176.0
2528 Male, age 74, both hemispheres 137.0
Entorhinal gyrus
nTPM: 187.5
2686 Male, age 75, right hemisphere 221.0
1787 Male, age 76, left hemisphere 202.8
2117 Female, age 91, right hemisphere 194.2
2764 Male, age 80, right hemisphere 186.2
1938 Female, age 85, left hemisphere 184.8
2613 Female, age 94, left hemisphere 136.0
Hippocampus, CA1
nTPM: 197.5
2749 Male, age 80, left hemisphere 212.2
2045 Male, age 76, both hemispheres 205.5
1873 Female, age 85, both hemispheres 195.4
2082 Female, age 91, right hemisphere 188.5
2527 Male, age 74, both hemispheres 185.9
Hippocampus, CA2
nTPM: 192.3
1892 Male, age 76, both hemispheres 215.2
1963 Male, age 80, left hemisphere 207.0
2437 Female, age 94, left hemisphere 200.3
1940 Female, age 85, left hemisphere 188.9
2249 Male, age 74, both hemispheres 176.8
2113 Female, age 91, right hemisphere 165.3
Hippocampus, CA3
nTPM: 167.3
1867 Male, age 76, both hemispheres 212.2
1891 Female, age 85, both hemispheres 188.5
2137 Male, age 80, left hemisphere 182.7
2861 Female, age 67, both hemispheres 152.6
2436 Male, age 74, both hemispheres 148.8
2620 Female, age 94, left hemisphere 119.0
Parahippocampal cortex
nTPM: 180.2
2018 Male, age 76, both hemispheres 225.9
1850 Male, age 80, both hemispheres 197.9
2245 Female, age 91, both hemispheres 195.8
1933 Female, age 85, both hemispheres 188.2
2532 Female, age 72, left hemisphere 185.6
2250 Female, age 67, right hemisphere 185.2
1990 Female, age 91, right hemisphere 174.1
2692 Male, age 74, both hemispheres 159.6
2622 Female, age 67, right hemisphere 147.5
2693 Female, age 94, both hemispheres 141.8
Perirhinal gyrus
nTPM: 194.1
1841 Female, age 85, right hemisphere 212.3
1794 Male, age 80, right hemisphere 210.1
1847 Female, age 91, left hemisphere 196.9
2848 Male, age 76, right hemisphere 184.2
2521 Female, age 94, right hemisphere 167.1
Subiculum
nTPM: 184.1
2042 Male, age 76, both hemispheres 207.3
1977 Female, age 85, both hemispheres 199.8
1901 Male, age 80, both hemispheres 198.4
2438 Female, age 94, left hemisphere 184.5
2729 Female, age 91, right hemisphere 165.3
2619 Male, age 74, both hemispheres 149.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 764.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 764.3
Samples: 255

Max nTPM: 1791.7
Min nTPM: 438.2
Std nTPM: 191.6
Median nTPM: 723.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1791.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1706.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1493.2
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1364.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1287.0
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1284.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1221.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1209.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1193.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1181.1
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 1102.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 247.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 247.8
FF:10169-103B7 60 years, female 294.9
FF:10153-102I9 76 years, female 200.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 153.3
Pig sample Sample description nTPM
Subiculum
nTPM: 145.0
Samples: 4

Max nTPM: 204.5
Min nTPM: 117.9
Sample A Female 204.5
Sample B Female 132.5
Sample C Male 117.9
Sample D Male 125.0
Dorsal hippocampus
nTPM: 153.3
Samples: 4

Max nTPM: 193.9
Min nTPM: 119.1
Sample A Female 193.9
Sample B Female 142.5
Sample C Male 157.7
Sample D Male 119.1
Entorhinal cortex
nTPM: 133.9
Samples: 4

Max nTPM: 158.8
Min nTPM: 105.7
Sample A Female 132.0
Sample B Female 158.8
Sample C Male 139.1
Sample D Male 105.7
Ventral hippocampus
nTPM: 137.4
Samples: 4

Max nTPM: 150.5
Min nTPM: 126.7
Sample A Female 150.5
Sample B Female 126.7
Sample C Male 131.8
Sample D Male 140.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 485.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 467.4
Samples: 4

Max nTPM: 507.5
Min nTPM: 433.7
Sample A Male 441.0
Sample B Male 487.5
Sample C Female 507.5
Sample D Female 433.7
Hippocampal formation
nTPM: 485.8
Samples: 4

Max nTPM: 561.7
Min nTPM: 447.2
Sample A Male 561.7
Sample B Male 454.5
Sample C Female 447.2
Sample D Female 479.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
69170150 Antisense, RP_050321_04_F12, Mouse strain C57BL/6J (56 days, male) 15.8

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