HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:17.9 nTPM
HPA Brain:25.0 nTPM
GTEx:17.9 nTPM
FANTOM5:19.0 Scaled Tags Per Million
Pig:16.6 nTPM
Mouse:30.8 nTPM
Allen mouse:8.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068322
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
2529 Female, age 94, left hemisphere 28.4
2148 Female, age 91, left hemisphere 25.1
2621 Female, age 67, right hemisphere 24.2
1898 Male, age 80, left hemisphere 19.4
1911 Female, age 85, right hemisphere 18.1
1855 Male, age 76, left hemisphere 15.9
Dentate gyrus
nTPM: 23.3
2531 Female, age 67, both hemispheres 30.6
1927 Female, age 91, both hemispheres 24.1
2528 Male, age 74, both hemispheres 23.0
2246 Female, age 85, both hemispheres 22.9
2530 Female, age 94, left hemisphere 21.3
2010 Male, age 76, both hemispheres 17.9
Entorhinal gyrus
nTPM: 23.3
2764 Male, age 80, right hemisphere 28.2
2613 Female, age 94, left hemisphere 27.1
1938 Female, age 85, left hemisphere 23.5
1787 Male, age 76, left hemisphere 21.3
2686 Male, age 75, right hemisphere 20.7
2117 Female, age 91, right hemisphere 19.3
Hippocampus, CA1
nTPM: 18.2
2527 Male, age 74, both hemispheres 25.0
2749 Male, age 80, left hemisphere 21.6
1873 Female, age 85, both hemispheres 16.1
2045 Male, age 76, both hemispheres 15.9
2082 Female, age 91, right hemisphere 12.5
Hippocampus, CA2
nTPM: 23.9
2437 Female, age 94, left hemisphere 30.2
2113 Female, age 91, right hemisphere 23.6
1892 Male, age 76, both hemispheres 22.6
2249 Male, age 74, both hemispheres 22.5
1940 Female, age 85, left hemisphere 22.3
1963 Male, age 80, left hemisphere 22.0
Hippocampus, CA3
nTPM: 25.0
2861 Female, age 67, both hemispheres 30.4
2620 Female, age 94, left hemisphere 30.2
1867 Male, age 76, both hemispheres 24.1
2137 Male, age 80, left hemisphere 24.0
2436 Male, age 74, both hemispheres 22.5
1891 Female, age 85, both hemispheres 19.1
Parahippocampal cortex
nTPM: 21.5
2245 Female, age 91, both hemispheres 28.9
2622 Female, age 67, right hemisphere 26.3
2250 Female, age 67, right hemisphere 24.1
2693 Female, age 94, both hemispheres 22.3
2532 Female, age 72, left hemisphere 21.6
1990 Female, age 91, right hemisphere 20.2
2018 Male, age 76, both hemispheres 20.1
1933 Female, age 85, both hemispheres 18.8
2692 Male, age 74, both hemispheres 16.4
1850 Male, age 80, both hemispheres 16.0
Perirhinal gyrus
nTPM: 21.2
2521 Female, age 94, right hemisphere 26.8
1794 Male, age 80, right hemisphere 23.2
2848 Male, age 76, right hemisphere 20.6
1847 Female, age 91, left hemisphere 18.9
1841 Female, age 85, right hemisphere 16.3
Subiculum
nTPM: 22.0
2438 Female, age 94, left hemisphere 28.9
1977 Female, age 85, both hemispheres 28.4
2729 Female, age 91, right hemisphere 20.3
2619 Male, age 74, both hemispheres 19.0
1901 Male, age 80, both hemispheres 18.1
2042 Male, age 76, both hemispheres 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 255

Max nTPM: 67.4
Min nTPM: 0.6
Std nTPM: 11.1
Median nTPM: 15.0
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 67.4
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 60.1
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 58.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 52.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 51.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 51.1
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 50.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 49.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 44.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 44.2
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 43.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 19.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.0
FF:10153-102I9 76 years, female 20.3
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 16.6
Pig sample Sample description nTPM
Subiculum
nTPM: 16.3
Samples: 4

Max nTPM: 21.1
Min nTPM: 13.8
Sample A Female 21.1
Sample B Female 14.9
Sample C Male 15.2
Sample D Male 13.8
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.3
Sample A Female 19.7
Sample B Female 17.5
Sample C Male 14.8
Sample D Male 14.3
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.1
Sample A Female 14.8
Sample B Female 17.3
Sample C Male 18.2
Sample D Male 13.1
Ventral hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.7
Sample A Female 15.9
Sample B Female 12.7
Sample C Male 20.2
Sample D Male 17.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.8
Samples: 4

Max nTPM: 32.5
Min nTPM: 29.0
Sample A Male 29.0
Sample B Male 31.9
Sample C Female 29.9
Sample D Female 32.5
Hippocampal formation
nTPM: 25.5
Samples: 4

Max nTPM: 27.7
Min nTPM: 21.9
Sample A Male 21.9
Sample B Male 25.3
Sample C Female 27.7
Sample D Female 26.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
69262258 Antisense, RP_050301_02_A06, Mouse strain C57BL/6J (56 days, male) 8.4

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