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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1210.2 nTPM
HPA:1210.2 nTPM
GTEx:749.0 nTPM
FANTOM5:918.8 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA004426Antibody CAB004647
Ovarian stroma cells LowHigh





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1210.2
overview
Female, age 64
Ovary sample 192
nTPM: 1122.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 963.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 1037.2
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 982.6
N/A
Female, age 16
Ovary sample 3663
nTPM: 1101.2
N/A
Female, age 20
Ovary sample 3664
nTPM: 1336.5
N/A
Female, age 32
Ovary sample 3665
nTPM: 1927.4

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

749.0
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 749.0
Samples: 193

Max nTPM: 1264.0
Min nTPM: 349.0
Std nTPM: 174.7
Median nTPM: 748.1
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 1264.0
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1151.0
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 1144.7
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 1117.3
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 1103.0
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 1087.2
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1074.7
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 1051.6
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 1050.5
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 1035.4
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 1021.3
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 1019.2
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 1014.5
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 1012.5
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 998.0
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 986.8
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 971.0
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 960.3
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 959.3
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 957.0
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 953.9
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 951.5
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 950.9
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 948.9
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 948.2
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 943.4
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 940.4
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 936.4
GTEX-QCQG-1426-SM-48U22 50-59 years, female 935.7
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 927.8
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 917.9
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 916.8
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 905.7
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 900.6
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 900.5
GTEX-11I78-1926-SM-59878 50-59 years, female 899.3
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 896.6
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 894.2
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 893.0
GTEX-15EOM-1526-SM-68723 20-29 years, female 883.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 882.5
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 882.1
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 878.6
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 878.2
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 876.7
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 873.0
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 866.9
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 862.1
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 860.0
GTEX-P78B-1926-SM-3P616 40-49 years, female 858.0
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 857.9
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 855.9
GTEX-RU72-2226-SM-46MUE 50-59 years, female 853.4
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 852.6
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 852.2
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 848.7
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 848.6
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 847.6
GTEX-14BIN-1426-SM-664NI 50-59 years, female 843.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 842.6
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 841.2
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 839.2
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 838.9
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 835.5
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 835.2
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 830.2
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 829.6
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 828.0
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 825.4
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 822.6
GTEX-18D9A-0826-SM-718C1 30-39 years, female 820.7
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 819.2
GTEX-R55G-1526-SM-48FER 40-49 years, female 818.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 815.8
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 815.1
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 814.7
GTEX-Q734-0726-SM-48TZP 40-49 years, female 809.7
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 803.7
GTEX-14PKV-1226-SM-6871T 20-29 years, female 801.6
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 801.1
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 800.9
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 800.0
GTEX-S341-0726-SM-4AD5R 40-49 years, female 799.3
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 794.4
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 793.3
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 789.7
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 781.3
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 780.7
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 780.6
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 779.0
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 772.6
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 766.6
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 764.9
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 757.7
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 753.9
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 752.9
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 748.1
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 746.6
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 746.0
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 741.7
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 741.4
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 739.5
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 738.8
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 734.2
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 731.2
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 731.2
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 730.6
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 730.2
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 723.9
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 722.9
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 714.5
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 714.3
GTEX-S32W-1226-SM-4AD67 50-59 years, female 713.2
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 712.5
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 710.4
GTEX-145ME-1226-SM-5MR87 40-49 years, female 707.9
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 706.8
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 705.1
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 703.5
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 701.7
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 698.9
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 698.1
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 697.0
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 696.9
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 696.7
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 687.6
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 684.3
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 680.5
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 674.7
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 674.0
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 671.8
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 669.0
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 667.7
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 667.2
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 664.8
GTEX-14JG6-0626-SM-68716 30-39 years, female 661.3
GTEX-13SLX-2426-SM-664OM 50-59 years, female 655.5
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 652.8
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 650.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 645.5
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 637.8
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 629.0
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 625.5
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 623.1
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 622.7
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 620.2
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 619.0
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 616.1
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 616.1
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 610.5
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 605.8
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 597.2
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 594.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 591.2
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 587.4
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 586.7
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 583.1
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 580.9
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 580.4
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 580.3
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 578.9
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 578.4
GTEX-QVJO-3126-SM-COH22 60-69 years, female 570.7
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 558.3
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 553.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 550.8
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 540.6
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 538.3
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 535.2
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 526.8
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 518.2
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 517.6
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 517.1
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 508.1
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 506.7
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 500.4
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 493.6
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 478.4
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 475.4
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 474.8
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 471.5
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 467.6
GTEX-R45C-2526-SM-GRR28 60-69 years, female 462.8
GTEX-183WM-1926-SM-72D5F 70-79 years, female 459.1
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 451.8
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 447.1
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 433.0
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 423.7
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 387.2
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 386.2
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 384.6
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 358.5
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 349.0
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OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

918.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 918.8
FF:10020-101D2 47,75,84 years, female 918.8

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