HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:2270.9 nTPM
HPA Brain:649.4 nTPM
GTEx:2270.9 nTPM
FANTOM5:608.2 Scaled Tags Per Million
Pig:0.1 nTPM
Mouse:623.1 nTPM
Allen mouse:3.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065327
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 649.4
Sample id Sample description nTPM
Hippocampus
nTPM: 649.4
2529 Female, age 94, left hemisphere 829.5
1898 Male, age 80, left hemisphere 717.4
2621 Female, age 67, right hemisphere 649.4
1911 Female, age 85, right hemisphere 586.5
1855 Male, age 76, left hemisphere 561.9
2148 Female, age 91, left hemisphere 551.5
Dentate gyrus
nTPM: 615.5
2530 Female, age 94, left hemisphere 937.7
2531 Female, age 67, both hemispheres 651.9
2246 Female, age 85, both hemispheres 617.1
2010 Male, age 76, both hemispheres 601.4
1927 Female, age 91, both hemispheres 465.4
2528 Male, age 74, both hemispheres 419.1
Entorhinal gyrus
nTPM: 617.1
2686 Male, age 75, right hemisphere 780.2
1787 Male, age 76, left hemisphere 618.2
2117 Female, age 91, right hemisphere 615.8
2764 Male, age 80, right hemisphere 612.0
1938 Female, age 85, left hemisphere 577.9
2613 Female, age 94, left hemisphere 498.5
Hippocampus, CA1
nTPM: 553.6
2045 Male, age 76, both hemispheres 589.6
2527 Male, age 74, both hemispheres 559.0
2082 Female, age 91, right hemisphere 553.6
1873 Female, age 85, both hemispheres 542.2
2749 Male, age 80, left hemisphere 523.8
Hippocampus, CA2
nTPM: 574.5
1963 Male, age 80, left hemisphere 716.7
2437 Female, age 94, left hemisphere 673.6
1892 Male, age 76, both hemispheres 593.2
1940 Female, age 85, left hemisphere 544.1
2113 Female, age 91, right hemisphere 512.7
2249 Male, age 74, both hemispheres 406.9
Hippocampus, CA3
nTPM: 530.9
2861 Female, age 67, both hemispheres 668.7
1891 Female, age 85, both hemispheres 630.7
1867 Male, age 76, both hemispheres 620.6
2137 Male, age 80, left hemisphere 472.5
2436 Male, age 74, both hemispheres 407.7
2620 Female, age 94, left hemisphere 385.5
Parahippocampal cortex
nTPM: 577.8
2018 Male, age 76, both hemispheres 752.7
2532 Female, age 72, left hemisphere 665.2
2245 Female, age 91, both hemispheres 614.2
1850 Male, age 80, both hemispheres 606.0
2250 Female, age 67, right hemisphere 599.8
1933 Female, age 85, both hemispheres 567.6
1990 Female, age 91, right hemisphere 545.0
2692 Male, age 74, both hemispheres 501.6
2622 Female, age 67, right hemisphere 487.7
2693 Female, age 94, both hemispheres 437.6
Perirhinal gyrus
nTPM: 621.6
1841 Female, age 85, right hemisphere 697.1
1794 Male, age 80, right hemisphere 661.0
1847 Female, age 91, left hemisphere 635.0
2848 Male, age 76, right hemisphere 622.7
2521 Female, age 94, right hemisphere 492.0
Subiculum
nTPM: 603.1
1977 Female, age 85, both hemispheres 711.8
2042 Male, age 76, both hemispheres 683.0
1901 Male, age 80, both hemispheres 645.5
2438 Female, age 94, left hemisphere 638.5
2619 Male, age 74, both hemispheres 473.4
2729 Female, age 91, right hemisphere 466.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2270.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2270.9
Samples: 255

Max nTPM: 7042.8
Min nTPM: 901.4
Std nTPM: 918.3
Median nTPM: 2078.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 7042.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 6170.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 6160.4
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 5244.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 5194.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 5130.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 4940.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 4629.9
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 4443.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 4097.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 4018.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 608.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 608.2
FF:10169-103B7 60 years, female 813.2
FF:10153-102I9 76 years, female 403.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 0.1
Pig sample Sample description nTPM
Subiculum
nTPM: 0.1
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.4
Sample C Male 0.0
Sample D Male 0.0
Dorsal hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.3
Sample C Male 0.0
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 623.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 623.1
Samples: 4

Max nTPM: 679.3
Min nTPM: 598.0
Sample A Male 598.0
Sample B Male 604.9
Sample C Female 679.3
Sample D Female 610.0
Hippocampal formation
nTPM: 607.7
Samples: 4

Max nTPM: 704.8
Min nTPM: 552.8
Sample A Male 704.8
Sample B Male 552.8
Sample C Female 589.8
Sample D Female 583.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69818311 Antisense, RP_050510_04_H03, Mouse strain C57BL/6J (56 days, male) 3.9

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