HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:24.7 nTPM
HPA Brain:25.0 nTPM
GTEx:24.7 nTPM
FANTOM5:30.4 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:46.5 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033605
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
2148 Female, age 91, left hemisphere 29.2
2529 Female, age 94, left hemisphere 25.9
1911 Female, age 85, right hemisphere 24.6
1855 Male, age 76, left hemisphere 24.3
1898 Male, age 80, left hemisphere 24.2
2621 Female, age 67, right hemisphere 21.9
Dentate gyrus
nTPM: 22.8
2531 Female, age 67, both hemispheres 25.5
1927 Female, age 91, both hemispheres 25.2
2528 Male, age 74, both hemispheres 23.1
2530 Female, age 94, left hemisphere 21.4
2246 Female, age 85, both hemispheres 21.3
2010 Male, age 76, both hemispheres 20.5
Entorhinal gyrus
nTPM: 19.3
2117 Female, age 91, right hemisphere 21.8
1938 Female, age 85, left hemisphere 21.7
2686 Male, age 75, right hemisphere 20.8
1787 Male, age 76, left hemisphere 20.2
2613 Female, age 94, left hemisphere 16.1
2764 Male, age 80, right hemisphere 15.5
Hippocampus, CA1
nTPM: 24.7
2749 Male, age 80, left hemisphere 27.0
1873 Female, age 85, both hemispheres 25.6
2527 Male, age 74, both hemispheres 24.2
2045 Male, age 76, both hemispheres 24.0
2082 Female, age 91, right hemisphere 22.7
Hippocampus, CA2
nTPM: 22.8
1963 Male, age 80, left hemisphere 29.7
1892 Male, age 76, both hemispheres 24.5
2113 Female, age 91, right hemisphere 23.6
2437 Female, age 94, left hemisphere 21.3
2249 Male, age 74, both hemispheres 19.0
1940 Female, age 85, left hemisphere 18.5
Hippocampus, CA3
nTPM: 24.1
2861 Female, age 67, both hemispheres 28.8
2436 Male, age 74, both hemispheres 26.3
2137 Male, age 80, left hemisphere 25.1
2620 Female, age 94, left hemisphere 21.7
1867 Male, age 76, both hemispheres 21.4
1891 Female, age 85, both hemispheres 21.3
Parahippocampal cortex
nTPM: 19.1
2245 Female, age 91, both hemispheres 22.5
2250 Female, age 67, right hemisphere 21.2
1933 Female, age 85, both hemispheres 20.7
2693 Female, age 94, both hemispheres 19.7
2692 Male, age 74, both hemispheres 19.3
1850 Male, age 80, both hemispheres 18.0
2532 Female, age 72, left hemisphere 18.0
2622 Female, age 67, right hemisphere 17.8
1990 Female, age 91, right hemisphere 17.0
2018 Male, age 76, both hemispheres 17.0
Perirhinal gyrus
nTPM: 20.1
1841 Female, age 85, right hemisphere 21.5
1847 Female, age 91, left hemisphere 21.3
1794 Male, age 80, right hemisphere 19.7
2848 Male, age 76, right hemisphere 19.3
2521 Female, age 94, right hemisphere 18.9
Subiculum
nTPM: 20.5
2729 Female, age 91, right hemisphere 26.2
1977 Female, age 85, both hemispheres 21.0
2042 Male, age 76, both hemispheres 21.0
2438 Female, age 94, left hemisphere 18.7
2619 Male, age 74, both hemispheres 18.1
1901 Male, age 80, both hemispheres 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.7
Samples: 255

Max nTPM: 46.5
Min nTPM: 14.0
Std nTPM: 5.5
Median nTPM: 24.4
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 46.5
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 41.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 40.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 38.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 38.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 37.7
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 37.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 36.1
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 35.4
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 35.4
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 35.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 30.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.4
FF:10153-102I9 76 years, female 34.9
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.4
Pig sample Sample description nTPM
Subiculum
nTPM: 12.6
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.9
Sample A Female 16.5
Sample B Female 11.8
Sample C Male 10.9
Sample D Male 11.2
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 15.1
Min nTPM: 12.4
Sample A Female 15.1
Sample B Female 13.3
Sample C Male 12.4
Sample D Male 12.9
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.8
Sample A Female 13.1
Sample B Female 12.9
Sample C Male 13.0
Sample D Male 10.8
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.8
Sample A Female 11.2
Sample B Female 10.8
Sample C Male 14.3
Sample D Male 12.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 46.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.3
Samples: 4

Max nTPM: 41.9
Min nTPM: 34.1
Sample A Male 38.3
Sample B Male 41.9
Sample C Female 38.7
Sample D Female 34.1
Hippocampal formation
nTPM: 46.5
Samples: 4

Max nTPM: 50.7
Min nTPM: 43.6
Sample A Male 45.6
Sample B Male 46.0
Sample C Female 50.7
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
69290668 Antisense, RP_050407_04_E02, Mouse strain C57BL/6J (56 days, male) 1.8
70919161 Antisense, RP_050712_04_C10, Mouse strain C57BL/6J (56 days, male) 1.0

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