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DDX39B
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  • DDX39B
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:93.4 nTPM
HPA:21.9 nTPM
GTEx:93.4 nTPM
FANTOM5:290.5 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA055334Antibody HPA058450Antibody CAB034012
Glandular cells MediumMediumHigh





SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.9
overview
Female, age 68
Salivary gland sample 216
nTPM: 58.5
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 5.9
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1.2
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.4
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 93.4
Samples: 181

Max nTPM: 155.9
Min nTPM: 55.2
Std nTPM: 16.4
Median nTPM: 92.1
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 155.9
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 154.6
GTEX-X261-2426-SM-4PQZU 50-59 years, male 149.5
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 147.3
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 130.2
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 126.8
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 123.8
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 119.3
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 118.8
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 118.7
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 116.8
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 116.7
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 115.8
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 115.7
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 115.5
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 115.1
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 113.5
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 113.4
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 112.8
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 112.1
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 112.0
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 111.5
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 110.8
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 110.0
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 109.5
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 107.9
GTEX-13O21-1926-SM-5MR39 50-59 years, male 107.5
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 107.5
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 107.5
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 107.4
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 107.1
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 106.6
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 106.5
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 105.7
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 105.6
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 105.0
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 104.9
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 104.7
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 104.6
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 102.8
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 102.7
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 102.7
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 102.7
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 101.8
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 101.5
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 101.1
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 100.4
GTEX-1445S-2926-SM-5O993 60-69 years, male 99.8
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 99.6
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 99.3
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 99.3
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 99.2
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 99.2
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 99.1
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 99.1
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 99.0
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 98.8
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 98.2
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 98.2
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 98.1
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 98.1
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 97.7
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 97.6
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 97.3
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 97.2
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 97.1
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 97.0
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 96.8
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 96.7
GTEX-1B932-0626-SM-731EM 40-49 years, female 96.7
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 96.5
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 96.4
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 96.3
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 95.5
GTEX-178AV-1426-SM-6LLID 40-49 years, male 95.4
GTEX-Y111-2626-SM-4TT24 50-59 years, male 95.1
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 94.9
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 94.6
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 94.5
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 94.2
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 94.1
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 93.5
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 93.5
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 93.4
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 93.3
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 93.2
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 93.1
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 92.8
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 92.8
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 92.3
GTEX-11P82-0926-SM-5986X 20-29 years, male 92.1
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 92.0
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 92.0
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 91.7
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 91.4
GTEX-146FR-1226-SM-5MR78 60-69 years, female 91.3
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 91.3
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 91.3
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 91.1
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 91.0
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 90.8
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 90.7
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 90.5
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 90.3
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 90.2
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 90.2
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 89.8
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 89.6
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 89.2
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 89.2
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 88.8
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 88.7
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 88.5
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 88.3
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 88.1
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 87.6
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 87.5
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 87.4
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 87.3
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 87.1
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 87.0
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 87.0
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 86.7
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 86.4
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 86.4
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 85.7
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 85.6
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 85.4
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 85.3
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 85.2
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 85.0
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 84.8
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 84.5
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 84.3
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 84.2
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 84.2
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 84.1
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 84.1
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 83.7
GTEX-13113-1526-SM-5EGHV 60-69 years, female 83.6
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 83.4
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 83.4
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 83.4
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 81.3
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 80.8
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 80.7
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 80.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 80.4
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 80.3
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 79.6
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 78.7
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 78.6
GTEX-15SHV-2226-SM-6M464 60-69 years, male 78.5
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 78.4
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 78.2
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 77.5
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 76.5
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 76.5
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 76.0
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 75.7
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 75.2
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 74.9
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 74.6
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 74.4
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 74.3
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 74.2
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 73.5
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 73.5
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 71.9
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 71.9
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 70.4
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 69.0
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 68.7
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 68.3
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 62.5
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 61.8
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 61.0
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 60.5
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 58.0
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 55.3
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 55.2
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

290.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 179.4
FF:10199-103F1 23 years, male 179.4
Salivary gland
Scaled Tags Per Million: 290.5
FF:10093-102C3 16-60 years, mixed 290.5
Submaxillary gland
Scaled Tags Per Million: 192.9
FF:10202-103F4 24 years, male 192.9

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