HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:12.5 nTPM
HPA Brain:54.3 nTPM
GTEx:12.5 nTPM
FANTOM5:49.9 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:28.6 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035066
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 54.3
Sample id Sample description nTPM
Hippocampus
nTPM: 40.7
1898 Male, age 80, left hemisphere 49.8
2148 Female, age 91, left hemisphere 43.0
1855 Male, age 76, left hemisphere 41.3
2621 Female, age 67, right hemisphere 39.7
1911 Female, age 85, right hemisphere 38.3
2529 Female, age 94, left hemisphere 32.3
Dentate gyrus
nTPM: 42.7
1927 Female, age 91, both hemispheres 58.2
2531 Female, age 67, both hemispheres 45.3
2010 Male, age 76, both hemispheres 43.6
2246 Female, age 85, both hemispheres 39.7
2528 Male, age 74, both hemispheres 39.3
2530 Female, age 94, left hemisphere 30.1
Entorhinal gyrus
nTPM: 41.6
1938 Female, age 85, left hemisphere 47.5
2613 Female, age 94, left hemisphere 46.7
2764 Male, age 80, right hemisphere 42.6
2686 Male, age 75, right hemisphere 40.2
1787 Male, age 76, left hemisphere 39.3
2117 Female, age 91, right hemisphere 33.0
Hippocampus, CA1
nTPM: 46.5
2749 Male, age 80, left hemisphere 55.2
1873 Female, age 85, both hemispheres 49.6
2045 Male, age 76, both hemispheres 48.1
2082 Female, age 91, right hemisphere 42.4
2527 Male, age 74, both hemispheres 37.3
Hippocampus, CA2
nTPM: 41.2
1892 Male, age 76, both hemispheres 51.0
2249 Male, age 74, both hemispheres 46.3
1963 Male, age 80, left hemisphere 45.5
2113 Female, age 91, right hemisphere 38.0
1940 Female, age 85, left hemisphere 35.8
2437 Female, age 94, left hemisphere 30.9
Hippocampus, CA3
nTPM: 45.5
2137 Male, age 80, left hemisphere 53.8
2620 Female, age 94, left hemisphere 51.4
2436 Male, age 74, both hemispheres 50.2
1867 Male, age 76, both hemispheres 41.8
1891 Female, age 85, both hemispheres 38.4
2861 Female, age 67, both hemispheres 37.6
Parahippocampal cortex
nTPM: 44.2
1850 Male, age 80, both hemispheres 55.0
2693 Female, age 94, both hemispheres 53.6
2245 Female, age 91, both hemispheres 47.5
1933 Female, age 85, both hemispheres 46.0
1990 Female, age 91, right hemisphere 44.3
2532 Female, age 72, left hemisphere 43.4
2250 Female, age 67, right hemisphere 42.3
2622 Female, age 67, right hemisphere 40.2
2018 Male, age 76, both hemispheres 36.3
2692 Male, age 74, both hemispheres 33.4
Perirhinal gyrus
nTPM: 54.3
1847 Female, age 91, left hemisphere 60.8
1794 Male, age 80, right hemisphere 56.4
2521 Female, age 94, right hemisphere 54.8
1841 Female, age 85, right hemisphere 51.8
2848 Male, age 76, right hemisphere 47.8
Subiculum
nTPM: 35.6
1977 Female, age 85, both hemispheres 40.5
1901 Male, age 80, both hemispheres 40.0
2729 Female, age 91, right hemisphere 37.6
2619 Male, age 74, both hemispheres 33.3
2438 Female, age 94, left hemisphere 31.2
2042 Male, age 76, both hemispheres 30.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 255

Max nTPM: 23.4
Min nTPM: 5.0
Std nTPM: 3.4
Median nTPM: 12.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 23.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 23.2
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 22.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 21.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 19.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 19.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 19.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 19.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 19.1
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 18.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 49.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.9
FF:10169-103B7 60 years, female 61.2
FF:10153-102I9 76 years, female 38.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.2
Pig sample Sample description nTPM
Subiculum
nTPM: 19.3
Samples: 4

Max nTPM: 21.3
Min nTPM: 16.2
Sample A Female 21.3
Sample B Female 19.1
Sample C Male 20.4
Sample D Male 16.2
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 19.0
Min nTPM: 17.7
Sample A Female 17.7
Sample B Female 18.7
Sample C Male 19.0
Sample D Male 18.6
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 24.8
Min nTPM: 20.1
Sample A Female 21.9
Sample B Female 24.8
Sample C Male 21.8
Sample D Male 20.1
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.6
Sample A Female 20.0
Sample B Female 20.2
Sample C Male 16.3
Sample D Male 15.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 30.1
Min nTPM: 26.3
Sample A Male 26.3
Sample B Male 28.4
Sample C Female 29.5
Sample D Female 30.1
Hippocampal formation
nTPM: 27.4
Samples: 4

Max nTPM: 29.8
Min nTPM: 23.2
Sample A Male 29.8
Sample B Male 28.7
Sample C Female 23.2
Sample D Female 28.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
72283348 Antisense, RP_051019_01_B11, Mouse strain C57BL/6J (56 days, male) 0.6

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