HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.5 nTPM
HPA Brain:80.8 nTPM
GTEx:13.5 nTPM
FANTOM5:83.8 Scaled Tags Per Million
Mouse:27.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030066Antibody HPA055561Antibody CAB018582
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 80.8
Sample id Sample description nTPM
Hippocampus
nTPM: 72.7
2621 Female, age 67, right hemisphere 91.9
1898 Male, age 80, left hemisphere 90.4
1855 Male, age 76, left hemisphere 76.3
1911 Female, age 85, right hemisphere 70.4
2148 Female, age 91, left hemisphere 67.6
2529 Female, age 94, left hemisphere 39.9
Dentate gyrus
nTPM: 68.1
1927 Female, age 91, both hemispheres 87.1
2530 Female, age 94, left hemisphere 80.7
2010 Male, age 76, both hemispheres 80.0
2246 Female, age 85, both hemispheres 67.6
2531 Female, age 67, both hemispheres 47.9
2528 Male, age 74, both hemispheres 45.2
Entorhinal gyrus
nTPM: 79.0
2613 Female, age 94, left hemisphere 118.7
1938 Female, age 85, left hemisphere 102.4
2764 Male, age 80, right hemisphere 86.6
1787 Male, age 76, left hemisphere 68.3
2686 Male, age 75, right hemisphere 66.6
2117 Female, age 91, right hemisphere 31.4
Hippocampus, CA1
nTPM: 80.8
2749 Male, age 80, left hemisphere 165.7
1873 Female, age 85, both hemispheres 83.7
2527 Male, age 74, both hemispheres 72.4
2082 Female, age 91, right hemisphere 48.1
2045 Male, age 76, both hemispheres 34.2
Hippocampus, CA2
nTPM: 68.7
1963 Male, age 80, left hemisphere 108.8
1892 Male, age 76, both hemispheres 87.2
2249 Male, age 74, both hemispheres 67.6
2113 Female, age 91, right hemisphere 52.2
2437 Female, age 94, left hemisphere 49.2
1940 Female, age 85, left hemisphere 47.1
Hippocampus, CA3
nTPM: 74.9
2137 Male, age 80, left hemisphere 154.1
2861 Female, age 67, both hemispheres 69.3
2436 Male, age 74, both hemispheres 59.8
2620 Female, age 94, left hemisphere 59.6
1867 Male, age 76, both hemispheres 55.7
1891 Female, age 85, both hemispheres 51.0
Parahippocampal cortex
nTPM: 64.0
1850 Male, age 80, both hemispheres 89.2
2245 Female, age 91, both hemispheres 74.2
1990 Female, age 91, right hemisphere 72.6
2622 Female, age 67, right hemisphere 71.4
1933 Female, age 85, both hemispheres 63.4
2532 Female, age 72, left hemisphere 62.3
2692 Male, age 74, both hemispheres 60.8
2693 Female, age 94, both hemispheres 55.6
2018 Male, age 76, both hemispheres 47.8
2250 Female, age 67, right hemisphere 42.9
Perirhinal gyrus
nTPM: 72.0
1847 Female, age 91, left hemisphere 95.7
2848 Male, age 76, right hemisphere 76.9
1794 Male, age 80, right hemisphere 72.4
1841 Female, age 85, right hemisphere 71.7
2521 Female, age 94, right hemisphere 43.5
Subiculum
nTPM: 52.4
1901 Male, age 80, both hemispheres 82.6
1977 Female, age 85, both hemispheres 60.8
2042 Male, age 76, both hemispheres 50.8
2438 Female, age 94, left hemisphere 49.7
2619 Male, age 74, both hemispheres 37.8
2729 Female, age 91, right hemisphere 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 255

Max nTPM: 47.2
Min nTPM: 0.6
Std nTPM: 9.7
Median nTPM: 10.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 47.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 43.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 43.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 39.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 38.0
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 36.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 35.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 34.3
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 33.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 33.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 83.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.8
FF:10169-103B7 60 years, female 106.9
FF:10153-102I9 76 years, female 60.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.1
Sample A Male 21.8
Sample B Male 23.3
Sample C Female 18.1
Sample D Female 23.0
Hippocampal formation
nTPM: 27.3
Samples: 4

Max nTPM: 33.4
Min nTPM: 20.9
Sample A Male 20.9
Sample B Male 33.1
Sample C Female 33.4
Sample D Female 21.7

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