HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:40.7 nTPM
HPA Brain:4.1 nTPM
GTEx:40.7 nTPM
FANTOM5:154.4 Scaled Tags Per Million
Pig:109.9 nTPM
Mouse:79.2 nTPM
Allen mouse:14.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046791Antibody CAB026383
Glial cells Not detectedNot detected
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 4.1
Sample id Sample description nTPM
Hippocampus
nTPM: 3.4
1911 Female, age 85, right hemisphere 4.6
1898 Male, age 80, left hemisphere 4.1
2148 Female, age 91, left hemisphere 3.5
2621 Female, age 67, right hemisphere 3.4
2529 Female, age 94, left hemisphere 2.5
1855 Male, age 76, left hemisphere 2.3
Dentate gyrus
nTPM: 3.0
1927 Female, age 91, both hemispheres 5.1
2010 Male, age 76, both hemispheres 3.3
2531 Female, age 67, both hemispheres 3.0
2530 Female, age 94, left hemisphere 2.5
2246 Female, age 85, both hemispheres 2.2
2528 Male, age 74, both hemispheres 1.8
Entorhinal gyrus
nTPM: 3.2
1938 Female, age 85, left hemisphere 3.6
1787 Male, age 76, left hemisphere 3.4
2764 Male, age 80, right hemisphere 3.4
2686 Male, age 75, right hemisphere 3.2
2117 Female, age 91, right hemisphere 2.8
2613 Female, age 94, left hemisphere 2.8
Hippocampus, CA1
nTPM: 3.2
2045 Male, age 76, both hemispheres 3.9
1873 Female, age 85, both hemispheres 3.8
2749 Male, age 80, left hemisphere 3.3
2082 Female, age 91, right hemisphere 2.8
2527 Male, age 74, both hemispheres 2.1
Hippocampus, CA2
nTPM: 3.0
2437 Female, age 94, left hemisphere 4.5
1963 Male, age 80, left hemisphere 4.0
1892 Male, age 76, both hemispheres 3.3
1940 Female, age 85, left hemisphere 2.7
2113 Female, age 91, right hemisphere 2.5
2249 Male, age 74, both hemispheres 1.2
Hippocampus, CA3
nTPM: 4.1
2861 Female, age 67, both hemispheres 6.1
2137 Male, age 80, left hemisphere 4.4
1867 Male, age 76, both hemispheres 3.9
2620 Female, age 94, left hemisphere 3.9
1891 Female, age 85, both hemispheres 3.3
2436 Male, age 74, both hemispheres 3.1
Parahippocampal cortex
nTPM: 2.7
2018 Male, age 76, both hemispheres 3.3
2622 Female, age 67, right hemisphere 3.1
1850 Male, age 80, both hemispheres 3.0
1933 Female, age 85, both hemispheres 3.0
2692 Male, age 74, both hemispheres 2.8
2245 Female, age 91, both hemispheres 2.7
2532 Female, age 72, left hemisphere 2.5
2693 Female, age 94, both hemispheres 2.5
1990 Female, age 91, right hemisphere 2.2
2250 Female, age 67, right hemisphere 1.8
Perirhinal gyrus
nTPM: 3.2
1794 Male, age 80, right hemisphere 3.8
1847 Female, age 91, left hemisphere 3.8
1841 Female, age 85, right hemisphere 3.7
2521 Female, age 94, right hemisphere 2.8
2848 Male, age 76, right hemisphere 2.1
Subiculum
nTPM: 3.4
2438 Female, age 94, left hemisphere 4.9
1901 Male, age 80, both hemispheres 4.1
2042 Male, age 76, both hemispheres 3.3
2729 Female, age 91, right hemisphere 2.9
2619 Male, age 74, both hemispheres 2.5
1977 Female, age 85, both hemispheres 2.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.7
Samples: 255

Max nTPM: 73.1
Min nTPM: 15.4
Std nTPM: 10.5
Median nTPM: 39.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 71.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 71.0
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 67.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.8
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 66.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 65.3
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 63.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 63.0
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 62.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 62.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 154.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 154.4
FF:10153-102I9 76 years, female 178.1
FF:10169-103B7 60 years, female 130.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 109.9
Pig sample Sample description nTPM
Subiculum
nTPM: 100.0
Samples: 4

Max nTPM: 130.7
Min nTPM: 79.2
Sample A Female 130.7
Sample B Female 85.1
Sample C Male 104.8
Sample D Male 79.2
Dorsal hippocampus
nTPM: 92.1
Samples: 4

Max nTPM: 104.2
Min nTPM: 71.5
Sample A Female 104.2
Sample B Female 94.7
Sample C Male 98.1
Sample D Male 71.5
Entorhinal cortex
nTPM: 109.9
Samples: 4

Max nTPM: 119.4
Min nTPM: 93.7
Sample A Female 119.4
Sample B Female 93.7
Sample C Male 118.6
Sample D Male 107.9
Ventral hippocampus
nTPM: 103.2
Samples: 4

Max nTPM: 143.8
Min nTPM: 73.8
Sample A Female 87.6
Sample B Female 73.8
Sample C Male 143.8
Sample D Male 107.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 79.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.2
Samples: 4

Max nTPM: 90.1
Min nTPM: 72.8
Sample A Male 81.0
Sample B Male 72.8
Sample C Female 72.9
Sample D Female 90.1
Hippocampal formation
nTPM: 72.2
Samples: 4

Max nTPM: 77.9
Min nTPM: 63.5
Sample A Male 63.5
Sample B Male 76.4
Sample C Female 77.9
Sample D Female 70.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
69013308 Antisense, RP_050309_02_C03, Mouse strain C57BL/6J (56 days, male) 14.1

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