HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:8.0 nTPM
HPA Brain:20.2 nTPM
GTEx:8.0 nTPM
FANTOM5:16.2 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:5.1 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB034331
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.2
2529 Female, age 94, left hemisphere 23.4
1855 Male, age 76, left hemisphere 21.3
2148 Female, age 91, left hemisphere 20.6
2621 Female, age 67, right hemisphere 20.3
1911 Female, age 85, right hemisphere 19.5
1898 Male, age 80, left hemisphere 16.4
Dentate gyrus
nTPM: 18.7
2530 Female, age 94, left hemisphere 20.8
2528 Male, age 74, both hemispheres 20.3
1927 Female, age 91, both hemispheres 18.7
2531 Female, age 67, both hemispheres 18.2
2246 Female, age 85, both hemispheres 17.4
2010 Male, age 76, both hemispheres 16.6
Entorhinal gyrus
nTPM: 19.3
2686 Male, age 75, right hemisphere 24.9
1787 Male, age 76, left hemisphere 19.6
2613 Female, age 94, left hemisphere 19.5
2764 Male, age 80, right hemisphere 18.8
2117 Female, age 91, right hemisphere 18.6
1938 Female, age 85, left hemisphere 14.5
Hippocampus, CA1
nTPM: 15.6
2527 Male, age 74, both hemispheres 18.9
1873 Female, age 85, both hemispheres 17.8
2082 Female, age 91, right hemisphere 15.2
2045 Male, age 76, both hemispheres 13.6
2749 Male, age 80, left hemisphere 12.4
Hippocampus, CA2
nTPM: 17.7
2437 Female, age 94, left hemisphere 21.0
1963 Male, age 80, left hemisphere 19.4
2249 Male, age 74, both hemispheres 17.2
1940 Female, age 85, left hemisphere 17.0
2113 Female, age 91, right hemisphere 16.4
1892 Male, age 76, both hemispheres 15.0
Hippocampus, CA3
nTPM: 17.9
2861 Female, age 67, both hemispheres 22.9
2620 Female, age 94, left hemisphere 20.1
1891 Female, age 85, both hemispheres 20.0
2436 Male, age 74, both hemispheres 16.4
1867 Male, age 76, both hemispheres 14.9
2137 Male, age 80, left hemisphere 13.0
Parahippocampal cortex
nTPM: 17.8
2622 Female, age 67, right hemisphere 21.8
2692 Male, age 74, both hemispheres 20.8
1990 Female, age 91, right hemisphere 20.6
2245 Female, age 91, both hemispheres 17.9
2250 Female, age 67, right hemisphere 17.8
2532 Female, age 72, left hemisphere 17.5
2018 Male, age 76, both hemispheres 17.2
2693 Female, age 94, both hemispheres 16.6
1933 Female, age 85, both hemispheres 14.4
1850 Male, age 80, both hemispheres 13.5
Perirhinal gyrus
nTPM: 13.9
1847 Female, age 91, left hemisphere 14.3
2848 Male, age 76, right hemisphere 14.2
2521 Female, age 94, right hemisphere 14.1
1841 Female, age 85, right hemisphere 13.7
1794 Male, age 80, right hemisphere 13.0
Subiculum
nTPM: 20.1
2042 Male, age 76, both hemispheres 23.8
2619 Male, age 74, both hemispheres 22.0
2729 Female, age 91, right hemisphere 20.2
2438 Female, age 94, left hemisphere 19.0
1901 Male, age 80, both hemispheres 18.4
1977 Female, age 85, both hemispheres 17.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 8.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.0
Samples: 255

Max nTPM: 17.1
Min nTPM: 3.3
Std nTPM: 2.1
Median nTPM: 7.6
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 17.1
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 16.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 15.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 14.2
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 13.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 12.9
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 12.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 12.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 12.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 12.1
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 11.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.2
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 15.8
Pig sample Sample description nTPM
Subiculum
nTPM: 15.5
Samples: 4

Max nTPM: 20.1
Min nTPM: 13.3
Sample A Female 20.1
Sample B Female 13.4
Sample C Male 15.3
Sample D Male 13.3
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.8
Sample A Female 16.6
Sample B Female 13.8
Sample C Male 17.9
Sample D Male 14.9
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 18.7
Min nTPM: 9.4
Sample A Female 16.4
Sample B Female 18.7
Sample C Male 9.4
Sample D Male 13.2
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.7
Sample A Female 15.9
Sample B Female 13.0
Sample C Male 17.6
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.5
Sample A Male 6.1
Sample B Male 5.4
Sample C Female 3.5
Sample D Female 4.7
Hippocampal formation
nTPM: 5.1
Samples: 4

Max nTPM: 5.2
Min nTPM: 4.8
Sample A Male 5.2
Sample B Male 5.0
Sample C Female 5.2
Sample D Female 4.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71612222 Antisense, RP_050927_02_D08, Mouse strain C57BL/6J (56 days, male) 0.1

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