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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
177.6
nTPM
HPA Brain:
42.7
nTPM
GTEx:
177.6
nTPM
FANTOM5:
27.3
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.7
Sample id
Sample description
nTPM
Amygdala nTPM: 42.7
2514
Male, age 75, right hemisphere
54.3
2814
Male, age 76, right hemisphere
54.1
2695
Female, age 67, right hemisphere
44.2
1987
Female, age 91, left hemisphere
34.2
2517
Female, age 94, left hemisphere
26.7
Basal amygdala nTPM: 28.8
1955
Male, age 76, both hemispheres
40.7
2609
Male, age 75, right hemisphere
40.2
2110
Male, age 80, left hemisphere
27.4
2827
Female, age 67, right hemisphere
25.6
2685
Female, age 94, left hemisphere
20.2
2243
Female, age 91, right hemisphere
18.7
Central amygdala nTPM: 35.5
1905
Male, age 76, both hemispheres
45.5
2515
Male, age 75, right hemisphere
44.5
2826
Female, age 94, left hemisphere
35.9
2701
Female, age 91, right hemisphere
25.8
2239
Male, age 80, left hemisphere
25.6
Corticomedial amygdala nTPM: 33.0
2428
Male, age 75, right hemisphere
50.1
2240
Male, age 76, both hemispheres
36.9
2429
Female, age 94, left hemisphere
36.7
2829
Male, age 80, left hemisphere
32.7
2242
Female, age 91, right hemisphere
23.6
2535
Female, age 67, right hemisphere
17.9
Lateral amygdala nTPM: 29.4
1883
Male, age 76, both hemispheres
45.0
2516
Male, age 75, right hemisphere
44.0
2830
Female, age 67, right hemisphere
30.1
2534
Female, age 94, left hemisphere
25.8
2256
Male, age 80, left hemisphere
20.6
2255
Female, age 91, right hemisphere
10.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
177.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 177.6
Samples: 181
Max nTPM: 564.3
Min nTPM: 90.0
Std nTPM: 55.6
Median nTPM: 169.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
564.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
390.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
378.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
355.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
333.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
326.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
287.5
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
280.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
277.1
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
261.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
249.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
248.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
247.1
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
245.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
234.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
230.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
229.8
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
229.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
224.1
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
222.5
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
222.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
222.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
219.3
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
214.4
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
213.9
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
213.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
210.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
209.5
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
209.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
208.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
207.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
207.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
207.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
205.5
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
205.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
204.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
203.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
203.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
202.7
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
201.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
201.8
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
200.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
199.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
197.9
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
197.7
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
196.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
195.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
195.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
195.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
194.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
193.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
192.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
191.9
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
191.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
191.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
189.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
189.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
188.9
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
188.4
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
187.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
187.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
185.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
185.3
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
185.1
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
184.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
183.0
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
182.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
182.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
181.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
180.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
179.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
179.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
179.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
179.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
179.0
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
178.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
176.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
175.9
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
175.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
175.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
175.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
174.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
174.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
172.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
171.9
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
171.9
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
171.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
171.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
170.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
170.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
169.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
168.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
168.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
167.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
167.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
166.6
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
165.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
165.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
163.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
163.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
163.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
163.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
161.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
161.3
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
161.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
159.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
158.6
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
158.5
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
157.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
157.8
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
157.5
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
157.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
157.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
156.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
156.4
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
156.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
155.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
154.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
154.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
153.2
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
152.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
152.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
152.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
151.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
150.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
149.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
149.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
148.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
147.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
147.1
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
146.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
146.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
143.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
143.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
142.8
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
142.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
141.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
140.5
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
139.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
139.7
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
139.3
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
138.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
138.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
138.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
138.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
137.5
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
137.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
135.9
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
135.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
135.3
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
135.1
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
135.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
134.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
134.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
133.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
132.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
132.5
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
132.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
132.1
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
129.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
128.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
127.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
127.2
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
125.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
125.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
124.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
123.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
121.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
120.6
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
120.5
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
119.9
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
116.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
115.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
114.6
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
114.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
110.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
109.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
108.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
106.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
102.8
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
90.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.