HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:35.3 nTPM
HPA Brain:28.6 nTPM
GTEx:35.3 nTPM
FANTOM5:22.9 Scaled Tags Per Million
Pig:6.1 nTPM
Mouse:3.8 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052598
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 28.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
1911 Female, age 85, right hemisphere 31.7
2529 Female, age 94, left hemisphere 31.5
1898 Male, age 80, left hemisphere 27.6
2621 Female, age 67, right hemisphere 24.2
1855 Male, age 76, left hemisphere 22.7
2148 Female, age 91, left hemisphere 19.2
Dentate gyrus
nTPM: 25.1
2530 Female, age 94, left hemisphere 32.9
2246 Female, age 85, both hemispheres 27.3
2010 Male, age 76, both hemispheres 26.8
2528 Male, age 74, both hemispheres 22.3
1927 Female, age 91, both hemispheres 21.8
2531 Female, age 67, both hemispheres 19.6
Entorhinal gyrus
nTPM: 28.6
2686 Male, age 75, right hemisphere 35.1
1938 Female, age 85, left hemisphere 33.6
2117 Female, age 91, right hemisphere 26.7
2764 Male, age 80, right hemisphere 25.7
1787 Male, age 76, left hemisphere 25.6
2613 Female, age 94, left hemisphere 25.2
Hippocampus, CA1
nTPM: 23.1
2527 Male, age 74, both hemispheres 26.1
2082 Female, age 91, right hemisphere 24.3
2045 Male, age 76, both hemispheres 23.3
1873 Female, age 85, both hemispheres 22.6
2749 Male, age 80, left hemisphere 19.3
Hippocampus, CA2
nTPM: 27.6
2113 Female, age 91, right hemisphere 31.0
1940 Female, age 85, left hemisphere 28.7
2437 Female, age 94, left hemisphere 28.6
1963 Male, age 80, left hemisphere 27.9
2249 Male, age 74, both hemispheres 25.4
1892 Male, age 76, both hemispheres 23.8
Hippocampus, CA3
nTPM: 21.7
1891 Female, age 85, both hemispheres 31.3
1867 Male, age 76, both hemispheres 24.1
2436 Male, age 74, both hemispheres 21.5
2861 Female, age 67, both hemispheres 20.9
2137 Male, age 80, left hemisphere 20.2
2620 Female, age 94, left hemisphere 12.2
Parahippocampal cortex
nTPM: 28.4
2018 Male, age 76, both hemispheres 32.1
2692 Male, age 74, both hemispheres 30.9
1933 Female, age 85, both hemispheres 30.5
1850 Male, age 80, both hemispheres 30.2
2532 Female, age 72, left hemisphere 29.7
2622 Female, age 67, right hemisphere 27.8
2250 Female, age 67, right hemisphere 26.7
2245 Female, age 91, both hemispheres 26.3
2693 Female, age 94, both hemispheres 25.5
1990 Female, age 91, right hemisphere 24.8
Perirhinal gyrus
nTPM: 26.9
1841 Female, age 85, right hemisphere 33.2
1847 Female, age 91, left hemisphere 27.5
2848 Male, age 76, right hemisphere 27.2
1794 Male, age 80, right hemisphere 26.4
2521 Female, age 94, right hemisphere 20.3
Subiculum
nTPM: 28.3
2042 Male, age 76, both hemispheres 35.0
2438 Female, age 94, left hemisphere 33.1
1901 Male, age 80, both hemispheres 30.6
1977 Female, age 85, both hemispheres 26.8
2619 Male, age 74, both hemispheres 22.9
2729 Female, age 91, right hemisphere 21.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.3
Samples: 255

Max nTPM: 88.9
Min nTPM: 9.7
Std nTPM: 12.5
Median nTPM: 33.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 88.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 78.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 77.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 75.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 69.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 67.1
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 66.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 64.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 63.4
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 61.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 61.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.9
FF:10169-103B7 60 years, female 24.9
FF:10153-102I9 76 years, female 21.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.1
Pig sample Sample description nTPM
Subiculum
nTPM: 6.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 7.5
Sample C Male 9.9
Sample D Male 4.3
Dorsal hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 9.6
Min nTPM: 2.2
Sample A Female 2.2
Sample B Female 5.6
Sample C Male 9.6
Sample D Male 2.6
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 9.0
Min nTPM: 2.4
Sample A Female 2.4
Sample B Female 6.1
Sample C Male 9.0
Sample D Male 3.4
Ventral hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 8.1
Min nTPM: 2.2
Sample A Female 2.2
Sample B Female 5.9
Sample C Male 8.1
Sample D Male 4.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 3.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.6
Samples: 4

Max nTPM: 6.3
Min nTPM: 1.8
Sample A Male 2.2
Sample B Male 4.2
Sample C Female 6.3
Sample D Female 1.8
Hippocampal formation
nTPM: 3.8
Samples: 4

Max nTPM: 5.4
Min nTPM: 1.4
Sample A Male 3.7
Sample B Male 4.6
Sample C Female 1.4
Sample D Female 5.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70717982 Antisense, RP_050419_03_C04, Mouse strain C57BL/6J (56 days, male) 0.0

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