HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:153.2 nTPM
HPA Brain:42.2 nTPM
GTEx:153.2 nTPM
FANTOM5:4.9 Scaled Tags Per Million
Pig:831.8 nTPM
Mouse:625.8 nTPM
Allen mouse:5.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047132
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 42.2
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
1898 Male, age 80, left hemisphere 49.7
2529 Female, age 94, left hemisphere 48.3
2621 Female, age 67, right hemisphere 46.0
1911 Female, age 85, right hemisphere 41.1
1855 Male, age 76, left hemisphere 34.5
2148 Female, age 91, left hemisphere 34.0
Dentate gyrus
nTPM: 41.7
2530 Female, age 94, left hemisphere 48.8
2010 Male, age 76, both hemispheres 45.9
2531 Female, age 67, both hemispheres 43.8
2246 Female, age 85, both hemispheres 38.6
2528 Male, age 74, both hemispheres 37.7
1927 Female, age 91, both hemispheres 35.7
Entorhinal gyrus
nTPM: 39.9
2686 Male, age 75, right hemisphere 48.0
1787 Male, age 76, left hemisphere 44.6
2117 Female, age 91, right hemisphere 40.7
2764 Male, age 80, right hemisphere 37.5
1938 Female, age 85, left hemisphere 35.2
2613 Female, age 94, left hemisphere 33.1
Hippocampus, CA1
nTPM: 38.7
2749 Male, age 80, left hemisphere 43.8
1873 Female, age 85, both hemispheres 39.6
2527 Male, age 74, both hemispheres 39.6
2082 Female, age 91, right hemisphere 36.6
2045 Male, age 76, both hemispheres 33.8
Hippocampus, CA2
nTPM: 39.4
1963 Male, age 80, left hemisphere 49.6
2437 Female, age 94, left hemisphere 44.1
1892 Male, age 76, both hemispheres 37.8
2113 Female, age 91, right hemisphere 37.1
2249 Male, age 74, both hemispheres 34.8
1940 Female, age 85, left hemisphere 32.9
Hippocampus, CA3
nTPM: 40.1
2861 Female, age 67, both hemispheres 47.4
1867 Male, age 76, both hemispheres 44.7
1891 Female, age 85, both hemispheres 41.2
2436 Male, age 74, both hemispheres 38.0
2137 Male, age 80, left hemisphere 36.3
2620 Female, age 94, left hemisphere 33.1
Parahippocampal cortex
nTPM: 35.8
2018 Male, age 76, both hemispheres 48.2
1850 Male, age 80, both hemispheres 38.5
1990 Female, age 91, right hemisphere 38.5
2622 Female, age 67, right hemisphere 36.6
1933 Female, age 85, both hemispheres 35.8
2532 Female, age 72, left hemisphere 34.4
2250 Female, age 67, right hemisphere 34.0
2692 Male, age 74, both hemispheres 33.9
2245 Female, age 91, both hemispheres 30.5
2693 Female, age 94, both hemispheres 27.1
Perirhinal gyrus
nTPM: 36.1
1794 Male, age 80, right hemisphere 42.1
1847 Female, age 91, left hemisphere 38.8
1841 Female, age 85, right hemisphere 34.7
2848 Male, age 76, right hemisphere 34.0
2521 Female, age 94, right hemisphere 31.1
Subiculum
nTPM: 41.5
1977 Female, age 85, both hemispheres 46.2
2042 Male, age 76, both hemispheres 45.9
2619 Male, age 74, both hemispheres 41.5
2438 Female, age 94, left hemisphere 39.3
1901 Male, age 80, both hemispheres 38.8
2729 Female, age 91, right hemisphere 37.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 153.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 153.2
Samples: 255

Max nTPM: 347.9
Min nTPM: 55.9
Std nTPM: 53.5
Median nTPM: 141.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 347.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 338.2
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 328.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 323.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 291.6
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 285.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 285.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 278.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 276.2
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 274.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 272.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.9
FF:10169-103B7 60 years, female 6.2
FF:10153-102I9 76 years, female 3.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 831.8
Pig sample Sample description nTPM
Subiculum
nTPM: 667.4
Samples: 4

Max nTPM: 921.1
Min nTPM: 524.4
Sample A Female 921.1
Sample B Female 636.1
Sample C Male 524.4
Sample D Male 587.8
Dorsal hippocampus
nTPM: 831.8
Samples: 4

Max nTPM: 1144.8
Min nTPM: 557.7
Sample A Female 1144.8
Sample B Female 728.7
Sample C Male 896.0
Sample D Male 557.7
Entorhinal cortex
nTPM: 669.2
Samples: 4

Max nTPM: 842.8
Min nTPM: 484.3
Sample A Female 602.7
Sample B Female 842.8
Sample C Male 746.9
Sample D Male 484.3
Ventral hippocampus
nTPM: 713.0
Samples: 4

Max nTPM: 828.3
Min nTPM: 605.7
Sample A Female 686.2
Sample B Female 605.7
Sample C Male 828.3
Sample D Male 731.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 625.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 564.1
Samples: 4

Max nTPM: 620.8
Min nTPM: 521.9
Sample A Male 580.9
Sample B Male 521.9
Sample C Female 620.8
Sample D Female 532.6
Hippocampal formation
nTPM: 625.9
Samples: 4

Max nTPM: 690.9
Min nTPM: 547.3
Sample A Male 690.9
Sample B Male 629.3
Sample C Female 547.3
Sample D Female 635.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
69112407 Antisense, RP_050324_02_G08, Mouse strain C57BL/6J (56 days, male) 5.0

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