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PCDHGC3
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • PCDHGC3
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:341.1 nTPM
FANTOM5:237.4 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA008755
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

341.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 341.1
Samples: 300

Max nTPM: 798.3
Min nTPM: 100.7
Std nTPM: 134.0
Median nTPM: 316.2
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 798.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 793.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 781.4
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 760.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 757.2
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 714.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 707.8
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 692.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 678.4
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 659.1
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 658.7
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 656.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 634.3
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 631.7
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 618.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 605.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 605.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 603.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 593.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 582.9
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 577.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 568.9
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 561.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 555.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 554.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 552.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 527.8
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 526.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 518.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 510.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 503.4
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 502.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 498.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 494.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 494.6
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 493.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 489.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 488.9
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 475.9
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 475.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 473.8
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 473.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 467.4
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 466.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 464.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 458.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 454.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 454.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 454.5
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 450.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 447.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 447.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 446.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 446.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 445.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 444.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 441.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 441.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 438.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 433.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 429.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 429.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 427.8
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 427.1
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 427.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 426.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 425.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 425.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 424.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 424.1
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 423.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 422.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 421.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 421.1
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 420.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 419.0
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 418.8
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 418.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 416.5
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 414.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 413.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 412.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 412.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 411.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 406.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 406.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 400.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 399.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 398.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 389.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 387.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 386.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 386.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 385.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 384.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 384.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 383.7
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 382.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 377.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 377.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 377.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 374.8
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 370.2
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 368.8
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 367.6
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 366.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 365.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 364.1
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 361.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 360.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 359.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 359.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 357.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 355.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 355.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 353.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 352.0
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 350.9
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 349.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 348.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 347.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 347.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 346.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 339.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 338.4
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 337.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 337.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 337.2
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 337.1
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 332.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 330.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 330.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 329.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 329.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 327.9
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 327.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 325.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 324.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 324.7
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 324.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 323.6
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 322.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 321.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 321.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 319.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 319.6
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 319.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 318.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 317.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 317.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 315.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 315.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 314.7
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 313.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 311.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 310.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 309.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 308.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 308.2
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 307.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 306.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 303.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 302.5
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 302.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 301.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 300.4
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 300.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 299.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 299.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 299.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 297.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 296.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 295.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 295.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 294.8
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 293.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 292.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 291.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 290.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 289.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 289.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 288.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 286.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 286.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 286.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 285.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 285.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 283.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 283.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 281.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 280.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 280.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 280.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 279.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 279.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 279.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 276.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 276.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 274.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 274.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 273.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 272.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 272.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 265.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 265.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 262.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 261.6
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 257.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 256.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 255.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 251.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 250.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 250.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 249.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 249.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 249.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 248.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 248.7
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 247.3
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 247.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 246.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 246.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 246.4
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 246.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 245.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 245.2
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 245.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 243.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 241.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 241.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 240.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 239.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 239.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 235.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 233.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 232.0
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 231.3
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 231.0
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 230.6
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 229.9
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 228.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 228.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 227.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 227.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 225.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 225.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 224.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 224.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 224.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 223.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 222.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 221.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 221.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 220.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 220.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 219.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 219.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 217.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 210.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 209.5
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 209.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 206.0
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 205.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 202.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 202.0
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 201.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 201.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 201.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 199.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 199.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 198.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 191.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 188.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 186.7
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 185.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 183.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 180.1
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 179.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 177.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 175.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 175.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 171.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 169.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 166.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 166.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 164.2
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 161.6
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 158.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 154.1
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 152.8
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 151.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 148.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 145.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 144.9
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 143.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 141.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 135.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 118.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 115.6
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 100.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

237.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 237.4
FF:10164-103B2 76 years, female 237.4

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