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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:453.8 nTPM
HPA:89.7 nTPM
GTEx:453.8 nTPM
FANTOM5:360.4 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003868Antibody CAB005284
Follicle cells Not detected-
Ovarian stroma cells LowMedium





OVARY - TISSUE (MS)i

The MS-based protein data details section shows detailed information about the individual samples used for the relative protein abundance measurements.

Intensity values provides a relative protein abundance comparable between different genes and samples. All samples comes from one female donor. Median detection value represents the tissue for specificity and distribution categories. Protein detection is defined as a non-missing intensity value, and protein values are set to missing for a tissue if more than half of its replicates lacked a measurement for that protein.

Read more
Median intensity 43748178
Replicate Intensity
Ovary_01
59140750
Ovary_02
43748178
Ovary_03
39074162

OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.7
overview
Female, age 64
Ovary sample 192
nTPM: 72.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 52.8
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 17.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 72.3
N/A
Female, age 16
Ovary sample 3663
nTPM: 205.2
N/A
Female, age 20
Ovary sample 3664
nTPM: 92.4
N/A
Female, age 32
Ovary sample 3665
nTPM: 114.6

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

453.8
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 453.8
Samples: 193

Max nTPM: 1411.8
Min nTPM: 196.0
Std nTPM: 177.3
Median nTPM: 423.1
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 1411.8
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1203.3
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 1092.0
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 928.0
GTEX-15EOM-1526-SM-68723 20-29 years, female 909.5
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 854.4
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 850.6
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 824.7
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 798.5
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 774.4
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 770.4
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 734.7
GTEX-14JG6-0626-SM-68716 30-39 years, female 727.6
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 719.9
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 714.1
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 713.2
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 673.6
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 669.9
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 647.9
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 634.4
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 632.6
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 632.1
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 631.6
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 617.9
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 611.8
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 606.8
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 599.5
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 596.0
GTEX-S32W-1226-SM-4AD67 50-59 years, female 595.1
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 593.2
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 588.2
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 583.8
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 582.7
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 576.1
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 575.9
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 575.2
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 575.0
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 574.8
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 573.8
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 571.3
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 569.2
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 568.4
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 567.4
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 561.0
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 554.8
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 553.8
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 548.7
GTEX-13SLX-2426-SM-664OM 50-59 years, female 537.5
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 536.7
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 536.6
GTEX-R55G-1526-SM-48FER 40-49 years, female 533.7
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 532.4
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 525.7
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 514.6
GTEX-QCQG-1426-SM-48U22 50-59 years, female 513.6
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 512.4
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 512.4
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 511.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 510.9
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 503.3
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 495.8
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 490.3
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 488.9
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 486.3
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 483.2
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 480.4
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 477.7
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 476.7
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 475.7
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 475.2
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 472.9
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 472.5
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 469.1
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 468.1
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 461.0
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 459.5
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 459.4
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 458.3
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 457.4
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 456.8
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 455.2
GTEX-R45C-2526-SM-GRR28 60-69 years, female 454.0
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 448.7
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 445.6
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 441.9
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 438.6
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 436.8
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 435.6
GTEX-145ME-1226-SM-5MR87 40-49 years, female 433.5
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 429.8
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 429.7
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 429.2
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 427.8
GTEX-S341-0726-SM-4AD5R 40-49 years, female 426.8
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 426.2
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 424.2
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 423.1
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 422.7
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 421.9
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 421.2
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 418.9
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 417.2
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 415.0
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 412.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 411.9
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 407.6
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 405.8
GTEX-RU72-2226-SM-46MUE 50-59 years, female 405.6
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 404.8
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 402.7
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 402.4
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 401.7
GTEX-11I78-1926-SM-59878 50-59 years, female 399.1
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 398.8
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 397.0
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 396.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 396.1
GTEX-183WM-1926-SM-72D5F 70-79 years, female 392.4
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 389.7
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 389.1
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 386.0
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 380.9
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 374.4
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 371.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 371.3
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 368.6
GTEX-QVJO-3126-SM-COH22 60-69 years, female 365.7
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 365.5
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 360.4
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 359.8
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 357.7
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 355.8
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 353.0
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 350.2
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 349.5
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 344.3
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 340.0
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 338.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 337.8
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 337.0
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 336.1
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 335.4
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 332.8
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 331.8
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 328.0
GTEX-P78B-1926-SM-3P616 40-49 years, female 327.9
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 326.2
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 323.7
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 323.4
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 323.0
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 317.7
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 316.7
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 316.4
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 316.3
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 315.1
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 313.3
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 311.9
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 309.9
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 309.3
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 308.4
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 308.0
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 306.9
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 304.0
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 299.9
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 296.0
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 295.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 293.1
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 290.0
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 286.7
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 284.0
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 281.3
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 277.1
GTEX-14PKV-1226-SM-6871T 20-29 years, female 272.3
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 269.5
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 267.4
GTEX-14BIN-1426-SM-664NI 50-59 years, female 266.6
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 265.9
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 260.4
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 259.5
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 256.8
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 255.4
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 246.6
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 243.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 240.8
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 239.5
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 221.6
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 219.1
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 217.1
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 211.7
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 209.1
GTEX-Q734-0726-SM-48TZP 40-49 years, female 204.5
GTEX-18D9A-0826-SM-718C1 30-39 years, female 201.5
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 196.0
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

360.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 360.4
FF:10020-101D2 47,75,84 years, female 360.4

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