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RPL36A
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL36A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:439.0 nTPM
FANTOM5:55.6 Scaled Tags Per Million
Pig:44.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA063979
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

439.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 439.0
Samples: 300

Max nTPM: 1097.7
Min nTPM: 202.1
Std nTPM: 131.7
Median nTPM: 415.2
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 1097.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1003.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 985.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 835.0
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 832.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 831.2
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 826.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 820.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 783.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 772.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 769.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 769.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 721.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 718.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 710.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 691.3
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 679.0
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 664.0
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 661.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 660.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 647.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 622.6
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 616.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 595.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 594.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 593.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 591.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 584.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 583.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 583.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 578.6
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 571.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 568.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 567.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 564.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 563.9
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 563.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 563.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 563.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 562.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 561.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 560.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 558.5
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 556.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 556.2
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 554.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 547.5
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 545.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 544.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 543.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 541.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 539.7
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 536.5
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 535.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 534.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 531.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 524.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 520.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 519.4
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 518.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 516.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 514.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 511.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 510.1
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 508.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 508.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 507.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 506.8
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 505.2
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 504.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 503.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 501.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 499.9
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 499.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 499.5
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 498.4
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 497.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 496.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 492.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 492.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 491.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 490.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 488.6
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 486.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 485.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 481.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 480.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 479.9
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 478.9
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 477.6
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 475.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 474.2
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 473.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 472.8
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 472.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 471.9
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 469.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 469.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 468.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 465.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 465.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 464.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 463.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 462.1
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 461.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 461.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 460.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 459.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 459.2
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 458.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 456.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 454.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 454.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 453.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 449.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 449.3
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 448.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 446.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 446.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 446.5
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 445.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 443.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 441.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 441.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 440.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 439.8
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 439.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 437.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 436.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 435.1
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 434.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 434.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 430.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 430.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 429.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 428.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 427.9
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 427.0
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 426.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 425.9
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 424.6
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 423.0
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 421.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 420.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 419.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 418.7
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 418.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 417.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 415.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 415.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 415.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 415.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 415.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 414.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 413.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 412.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 412.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 411.7
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 411.6
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 411.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 411.1
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 410.7
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 410.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 410.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 405.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 403.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 401.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 401.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 400.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 398.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 398.7
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 398.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 397.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 397.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 396.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 395.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 393.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 392.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 392.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 391.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 389.5
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 389.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 387.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 386.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 386.0
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 385.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 385.5
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 384.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 383.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 383.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 383.0
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 382.0
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 381.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 381.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 380.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 380.0
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 379.3
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 379.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 378.4
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 376.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 374.8
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 373.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 373.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 373.2
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 373.1
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 370.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 369.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 368.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 367.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 363.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 362.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 361.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 361.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 360.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 359.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 359.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 358.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 358.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 354.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 352.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 350.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 349.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 349.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 349.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 348.8
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 348.8
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 348.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 347.1
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 346.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 345.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 344.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 343.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 343.4
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 342.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 341.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 339.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 339.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 336.1
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 335.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 335.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 335.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 334.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 331.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 331.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 330.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 329.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 329.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 328.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 327.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 326.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 326.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 325.2
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 325.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 323.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 319.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 319.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 319.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 318.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 317.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 315.2
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 314.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 311.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 310.0
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 309.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 308.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 307.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 307.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 302.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 301.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 301.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 299.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 299.7
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 294.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 293.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 293.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 292.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 289.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 289.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 287.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 287.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 287.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 286.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 286.0
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 283.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 282.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 280.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 278.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 273.2
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 268.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 264.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 263.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 260.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 255.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 255.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 254.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 252.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 249.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 233.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 213.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 202.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

55.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 55.6
FF:10164-103B2 76 years, female 55.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.8
Pig sample Sample description nTPM
Caudate
nTPM: 44.8
Samples: 4

Max nTPM: 48.3
Min nTPM: 38.6
Sample A Female 47.2
Sample B Female 45.1
Sample C Male 48.3
Sample D Male 38.6

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